Conical Intersections in Thymine
- 18 November 2006
- journal article
- research article
- Published by American Chemical Society (ACS) in The Journal of Physical Chemistry A
- Vol. 110 (49) , 13238-13244
- https://doi.org/10.1021/jp0633897
Abstract
The mechanisms which are responsible for the radiationless deactivation of the nπ* and ππ* excited singlet states of thymine have been investigated with multireference ab initio methods (the complete-active-space self-consistent-field (CASSCF) method and second-order perturbation theory with respect to the CASSCF reference (CASPT2)) as well as with the CC2 (approximated singles and doubles coupled-cluster) method. The vertical excitation energies, the equilibrium geometries of the 1nπ* and 1ππ* states, as well as their adiabatic excitation energies have been determined. Three conical intersections of the S1 and S0 energy surfaces have been located. The energy profiles of the excited states and the ground state have been calculated with the CASSCF method along straight-line reaction paths leading from the ground-state equilibrium geometry to the conical intersections. All three conical intersections are characterized by strongly out-of-plane distorted geometries. The lowest-energy conical intersection (CI1) arises from a crossing of the lowest 1ππ* state with the electronic ground state. It is found to be accessible in a barrierless manner from the minimum of the 1ππ* state, providing a direct and fast pathway for the quenching of the population of the lowest optically allowed excited states of thymine. This result explains the complete diffuseness of the absorption spectrum of thymine in supersonic jets. The lowest vibronic levels of the optically nearly dark 1nπ* state are predicted to lie below CI1, explaining the experimental observation of a long-lived population of dark excited states in gas-phase thymine.Keywords
This publication has 46 references indexed in Scilit:
- Three-State Conical Intersections in Nucleic Acid BasesThe Journal of Physical Chemistry A, 2005
- Cover Picture: Direct Visualization of Lipid Phase Segregation in Single Lipid Bilayers with Coherent Anti‐Stokes Raman Scattering Microscopy (ChemPhysChem 1/2005)Chemphyschem, 2005
- TDDFT investigation on nucleic acid bases: Comparison with experiments and standard approachJournal of Computational Chemistry, 2004
- The nucleobase cytosine and the cytosine dimer investigated by double resonance laser spectroscopy and ab initio calculationsPhysical Chemistry Chemical Physics, 2003
- Resonant two-photon ionization and laser induced fluorescence spectroscopy of jet-cooled adenineThe Journal of Chemical Physics, 2000
- Primary Photochemical Processes in Thymine in Concentrated Aqueous Solution Studied by Femtosecond UV SpectroscopyThe Journal of Physical Chemistry, 1996
- Theoretical Study of the Electronic Spectra of Uracil and ThymineJournal of the American Chemical Society, 1995
- Fully optimized contracted Gaussian basis sets for atoms Li to KrThe Journal of Chemical Physics, 1992
- Density matrix averaged atomic natural orbital (ANO) basis sets for correlated molecular wave functionsTheoretical Chemistry Accounts, 1990
- The stability of helical polynucleotides: Base contributionsJournal of Molecular Biology, 1962