Generation of a high-resolution genetic map and a YAC contig of the Lurcher locus on mouse chromosome 6.
Open Access
- 1 November 1995
- journal article
- Published by Cold Spring Harbor Laboratory in Genome Research
- Vol. 5 (4) , 381-392
- https://doi.org/10.1101/gr.5.4.381
Abstract
Lurcher (Lc) is a semidominant mouse mutant that displays progressive neurodegeneration during perinatal development. This genetic lesion results in apoptotic neuronal death in a dosage dependent and cell autonomous manner in specific neurons during their terminal differentiation. To understand the molecular basis of the Lc mutation, we have adopted a positional cloning approach based on its location on mouse chromosome 6. To define the Lc locus, we have extended our previous analysis of an intersubspecific backcross between Mus m. castaneus and B6CBACa-Aw-j/A-Lc consisting of 504 animals (Norman et al. 1991). In addition, 580 animals of a generic backcross between Mus spretus and C57BL/6 (The European Collaborative Interspecific Backcross) were utilized for the fine genetic mapping of the Lc locus. Using three RFLP markers and nine microsatellite markers in the vicinity of the Lc locus, we determined the order and relative genetic distances of these markers at a resolution of 0.1 cM. The Lc mutation was mapped between two flanking markers, D6Mit121 and D6Mit175, separated by a genetic distance of 0.5 cM. We then initiated the cloning of the genomic region surrounding these two markers by screening a YAC library and characterizing YAC end sequences for further screening. This effort has resulted in the construction of a YAC contig consisting of 14 YACs and spanning a 3-Mb region. Markers isolated from these YACs were used to further define the Lc locus, resulting in a physical map that places the Lc gene within an estimated 300-kb interval. This set of YACs and markers will serve as DNA sources for the identification of the Lc gene.Keywords
This publication has 18 references indexed in Scilit:
- MATS: a rapid and efficient method for the development of microsatellite markers from YACsGenomics, 1995
- A genetic map of the mouse with 4,006 simple sequence length polymorphismsNature Genetics, 1994
- Assignment of the Human Growth Hormone-Releasing Hormone Receptor Gene (GHRHR) to 7p14 by in Situ HybridizationGenomics, 1994
- The little (lit) mutation cosegregates with the growth hormone releasing factor receptor on mouse Chromosome 6Mammalian Genome, 1993
- Adaptation of the interspersed repetitive sequence polymerase chain reaction to the isolation of mouse DNA probes from somatic cell hybrids on a hamster backgroundGenomics, 1991
- Yeast artificial chromosome cloning of a two-megabase-size contig within chromosomal band 18q21 establishes physical linkage between BCL2 and plasminogen activator inhibitor type-2Genomics, 1991
- Genetic mapping of the lurcher locus on mouse chromosome 6 using an intersubspecific backcrossGenomics, 1991
- Sex, strain, and species differences affect recombination across an evolutionarily conserved segment of mouse chromosome 16Genomics, 1990
- Interaction of granule, Purkinje and inferior olivary neurons in lurcher chimeric mice. II. Granule cell deathBrain Research, 1982
- ‘Lurcher’, a new gene in linkage group XI of the house mouseJournal of Genetics, 1960