Proposal of Roseburia faecis sp. nov., Roseburia hominis sp. nov. and Roseburia inulinivorans sp. nov., based on isolates from human faeces
- 1 October 2006
- journal article
- Published by Microbiology Society in International Journal of Systematic and Evolutionary Microbiology
- Vol. 56 (10) , 2437-2441
- https://doi.org/10.1099/ijs.0.64098-0
Abstract
Seven recently cultured bacterial isolates, although similar in their 16S rRNA gene sequences toRoseburia intestinalisL1-82T(DSM 14610T), were not sufficiently related for inclusion within existing species, forming three separate clusters in a 16S rRNA gene phylogenetic tree. The isolates, which were obtained from human stools, were Gram-variable or Gram-negative, strictly anaerobic, slightly curved rods; cells from all strains measured approximately 0.5×1.5–5.0 μm and were motile. Two strains belonging to one cluster (A2-181 and A2-183T) were the only strains that were able to grow on glycerol and that failed to grow on any of the complex substrates tested (inulin, xylan and amylopectin). Strains belonging to a second cluster (represented by M6/1 and M72/1T) differed from the other isolates in their ability to grow on sorbitol. Isolates belonging to a third cluster (L1-83 and A2-194T) were the only strains that failed to grow on xylose and that gave good growth on inulin (strains M6/1 and M72/1Tgave weak growth). All strains were net acetate utilizers. The DNA G+C contents of representativeRoseburiastrains A2-183T, A2-194T, M72/1TandR. intestinalisL1-82Twere 47.4, 41.4, 42.0 and 42.6 mol%, respectively. Based on 16S rRNA gene sequence similarity, three novelRoseburiaspecies are proposed, with the namesRoseburia hominissp. nov. (type strain A2-183T=DSM 16839T=NCIMB 14029T),Roseburia inulinivoranssp. nov. (type strain A2-194T=DSM 16841T=NCIMB 14030T) andRoseburia faecissp. nov. (type strain M72/1T=DSM 16840T=NCIMB 14031T).Keywords
This publication has 17 references indexed in Scilit:
- Restricted Distribution of the Butyrate Kinase Pathway among Butyrate-Producing Bacteria from the Human ColonJournal of Bacteriology, 2004
- Oligonucleotide Probes That Detect Quantitatively Significant Groups of Butyrate-Producing Bacteria in Human FecesApplied and Environmental Microbiology, 2003
- Effects of Alternative Dietary Substrates on Competition between Human Colonic Bacteria in an Anaerobic Fermentor SystemApplied and Environmental Microbiology, 2003
- The RDP-II (Ribosomal Database Project)Nucleic Acids Research, 2001
- Phylogenetic Relationships of Butyrate-Producing Bacteria from the Human GutApplied and Environmental Microbiology, 2000
- The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis toolsNucleic Acids Research, 1997
- Degradation and Utilization of Xylans by the Rumen AnaerobePrevotella bryantii(formerlyP. ruminicolasubsp.brevis) B14Anaerobe, 1997
- A Hidden Markov Model approach to variation among sites in rate of evolutionMolecular Biology and Evolution, 1996
- Precise Measurement of the G+C Content of Deoxyribonucleic Acid by High-Performance Liquid ChromatographyInternational Journal of Systematic and Evolutionary Microbiology, 1989
- Determination of DNA base composition by reversed-phase high-performance liquid chromatographyFEMS Microbiology Letters, 1984