Quantification of RT-PCR Products: Ethidium Bromide—Stained Gel Analysis Compared With Fluorescent Detection Using an Automated Sequencer

Abstract
Reverse transcription–polymerase chain reaction (RT-PCR) is a powerful tool to study gene expression and is used increasingly in clinical medicine and predictive oncology. We compared two techniques for semiquantitation of interleukin-6 RT-PCR products: video image analysis of ethidium bromide-stained gel and a fluorescent-based technique using an automated sequencer. We found a significant correlation between the two detection techniques (P < .01) in our series of 64 samples. Our results strongly suggest good reliability of the video image analysis compared with sequencer quantitation; video image analysis could be a good alternative for laboratories without a sequencer.

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