Human Y5 RNA specializes a Ro ribonucleoprotein for 5S ribosomal RNA quality control
Open Access
- 1 December 2007
- journal article
- Published by Cold Spring Harbor Laboratory in Genes & Development
- Vol. 21 (23) , 3067-3072
- https://doi.org/10.1101/gad.1603907
Abstract
Humans express four distinct non-protein-coding Y RNAs (ncRNAs). To investigate Y RNA functional diversification, we exploited an RNA-based affinity purification method to isolate ribonucleoproteins (RNPs) assembled on individual human Y RNAs. Silver staining and mass spectrometry revealed that the Ro and La proteins assemble with all Y RNAs, while additional proteins associate with specific Y RNAs. Unexpectedly, Y5 RNA uniquely copurified ribosomal protein L5 and its binding partner 5S RNA. These findings reveal a contribution of Y5 to 5S surveillance and suggest that interactions between Ro-Y5 and L5–5S RNPs establish 5S RNA as a target of quality control.Keywords
This publication has 22 references indexed in Scilit:
- An ortholog of the Ro autoantigen functions in 23S rRNA maturation in D. radioduransGenes & Development, 2007
- Ro-Associated Y RNAs in Metazoans: Evolution and DiversificationMolecular Biology and Evolution, 2007
- RNA-based affinity purification reveals 7SK RNPs with distinct composition and regulationRNA, 2007
- The relationship between non‐protein‐coding DNA and eukaryotic complexityBioEssays, 2007
- Structural and biochemical basis for misfolded RNA recognition by the Ro autoantigenNature Structural & Molecular Biology, 2006
- Nucleolin Associates with a Subset of the Human Ro Ribonucleoprotein ComplexesJournal of Molecular Biology, 2002
- Reversible cross-linking combined with immunoprecipitation to study RNA–protein interactions in vivoMethods, 2002
- The Tandem Affinity Purification (TAP) Method: A General Procedure of Protein Complex PurificationMethods, 2001
- A possible role for the 60-kD Ro autoantigen in a discard pathway for defective 5S rRNA precursors.Genes & Development, 1994
- A 5S rRNA/L5 complex is a precursor to ribosome assembly in mammalian cells.The Journal of cell biology, 1988