Genetic diversity in European and Argentinian cultivated potatoes (Solanum tuberosumsubsp.tuberosum) detected by inter-simple sequence repeats (ISSRs)
- 1 June 2002
- journal article
- Published by Canadian Science Publishing in Genome
- Vol. 45 (3) , 481-484
- https://doi.org/10.1139/g02-002
Abstract
In this study, the use of inter-simple sequence repeats (ISSR) to assess genetic diversity between cultivated potatoes (Solanum tuberosum subsp. tuberosum) is reported. ISSR technology rapidly reveals high polymorphic fingerprints and thus determines the genetic diversity among potato cultivars. Nine primers were selected according to the number of amplified markers and the level of polymorphism detected. Three primers (GAG(CAA)5, CTG(AG)8, and (AG)8) were used to cluster the 28 potato accessions and 77 polymorphic markers were sufficient to identify all of the accessions. Among the 15 simple sequence repeat (SSR) motifs tested, the most abundant were CAA and AG. Argentinian- and European-grown potatoes were easily distinguished, with a higher level of genetic diversity among potatoes from Argentina. An ISSR study using a limited number of cultivars and very few primers clearly differentiated between all cultivars, thus ISSR was revealed to be a good tool for the genetic identification of potato and for future germplasm-management programs.Key words: Solanum tuberosum subsp. tuberosum, potato, ISSR, genetic diversity.Keywords
This publication has 17 references indexed in Scilit:
- Nonanchored Inter Simple Sequence Repeat (ISSR) markers: Reproducible and specific tools for genome fingerprintingPlant Molecular Biology Reporter, 2001
- Genetic diversity among Northwestern Argentinian cultivars of common bean (Phaseolus vulgaris L.) as revealed by RAPD markersGenetic Resources and Crop Evolution, 2001
- The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheatEuphytica, 2000
- A comparative assessment of DNA fingerprinting techniques (RAPD, ISSR, AFLP and SSR) in tetraploid potato (Solanum tuberosum L.) germplasmEuphytica, 2000
- Comparison of similarity coefficients based on RAPD markers in the common beanGenetics and Molecular Biology, 1999
- Isolation, characterisation and mapping of simple sequence repeat loci in potatoMolecular Genetics and Genomics, 1998
- Comparison of PCR-based marker systems for the analysis of genetic relationships in cultivated potatoMolecular Breeding, 1997
- Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratoriesMolecular Breeding, 1997
- Assessment of genetic diversity in dent and popcorn (Zea mays L.) inbred lines using inter-simple sequence repeat (ISSR) amplificationMolecular Breeding, 1995
- Polymerase chain reaction-based assays for the characterisation of plant genetic resourcesElectrophoresis, 1995