A scaffold-associated DNA region is located downstream of the pea plastocyanin gene.
- 1 November 1991
- journal article
- Published by Oxford University Press (OUP) in Plant Cell
- Vol. 3 (11) , 1239-1250
- https://doi.org/10.1105/tpc.3.11.1239
Abstract
Chromosomal scaffold-associated DNA has been isolated from pea leaf nuclei treated with lithium diiodosalicylate to remove histones and then digested with restriction enzymes to remove the DNA in chromosomal loops. A scaffold-associated region (SAR) of DNA has been identified 8 to 9 kb downstream of the single-copy pea plastocyanin gene in proximity to a repetitive sequence present in 300 copies in the pea haploid genome. Isolated restriction fragments from within the SAR can bind to scaffold preparations in a binding assay in vitro. The nucleotide sequence of the SAR indicates a 540-bp 77% A+T-rich region containing many sequence elements in common with SARs from other organisms. Sequences with homology to topoisomerase II binding sites, A-box and T-box sequences, and replication origins are present within this AT-rich region.Keywords
This publication has 28 references indexed in Scilit:
- Hierarchical binding of DNA fragments derived from scaffold-attached regions: correlation of properties in vitro and function in vivoBiochemistry, 1990
- The chicken lysozyme 5' matrix attachment region increases transcription from a heterologous promoter in heterologous cells and dampens position effects on the expression of transfected genes.Molecular and Cellular Biology, 1990
- Nuclear matriax attachment occurs in several regions of the IgH locusNucleic Acids Research, 1990
- Replication forks are associated with the nuclear matrixNucleic Acids Research, 1990
- Supragenic loop organization: mapping inDrosophilaembryos, of scaffold-associated regions on a 800 kilobase DNA continuum cloned from the 14B-15B first chromosome regionNucleic Acids Research, 1990
- HMG I-like proteins from leaf and nodule nuclei interact with different AT motifs in soybean nodulin promoters.Plant Cell, 1990
- A nuclear DNA attachment element mediates elevated and position-independent gene activityNature, 1989
- Illegitimate recombination mediated by calf thymus DNA topoisomerase II in vitro.Proceedings of the National Academy of Sciences, 1988
- Anchorage of the Chinese hamster dihydrofolate reductase gene to the nuclear scaffold occurs in an intragenic regionJournal of Molecular Biology, 1987
- Replication origins are attached to the nuclear skeletonNucleic Acids Research, 1986