Changes in the gene expression profile of Arabidopsis thaliana after infection with Tobacco etch virus
Open Access
- 7 August 2008
- journal article
- research article
- Published by Springer Nature in Virology Journal
- Vol. 5 (1) , 92
- https://doi.org/10.1186/1743-422x-5-92
Abstract
Tobacco etch potyvirus (TEV) has been extensively used as model system for the study of positive-sense RNA virus infecting plants. TEV ability to infect Arabidopsis thaliana varies among ecotypes. In this study, changes in gene expression of A. thaliana ecotype Ler infected with TEV have been explored using long-oligonucleotide arrays. A. thaliana Ler is a susceptible host that allows systemic movement, although the viral load is low and syndrome induced ranges from asymptomatic to mild. Gene expression profiles were monitored in whole plants 21 days post-inoculation (dpi). Microarrays contained 26,173 protein-coding genes and 87 miRNAs.Keywords
This publication has 41 references indexed in Scilit:
- Chromatin assembly factor 1 regulates the cell cycle but not cell fate during male gametogenesis inArabidopsis thalianaDevelopment, 2008
- KEGG for linking genomes to life and the environmentNucleic Acids Research, 2007
- The lithium tolerance of the Arabidopsis cat2 mutant reveals a cross‐talk between oxidative stress and ethyleneThe Plant Journal, 2007
- Solution Structure of the Arabidopsis thaliana Telomeric Repeat-binding Protein DNA Binding Domain: A New Fold with an Additional C-terminal HelixJournal of Molecular Biology, 2006
- Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological informationBioinformatics, 2005
- P1/HC-Pro, a Viral Suppressor of RNA Silencing, Interferes with Arabidopsis Development and miRNA FunctionDevelopmental Cell, 2003
- Significance analysis of microarrays applied to the ionizing radiation responseProceedings of the National Academy of Sciences, 2001
- Genes controlling expression of defense responses in ArabidopsisCurrent Opinion in Plant Biology, 1999
- CLA1, a novel gene required for chloroplast development, is highly conserved in evolutionThe Plant Journal, 1996
- A novel leaf-specific myb-related protein with a single binding repeatGene, 1996