Expanded versions of the 16S and 23S ribosomal RNA mutation databases (16SMDBexp and 23SMDBexp) [published erratum appears in Nucleic Acids Res 1998 Feb 15;26(4):following 1134]
- 1 January 1998
- journal article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 26 (1) , 280-284
- https://doi.org/10.1093/nar/26.1.280
Abstract
Expanded versions of the Ribosomal RNA Mutation Databases provide lists of mutated positions in 16S and 16S-like ribosomal RNA (16SMDBexp) and 23S and 23S-like ribosomal RNA (23SMDBexp) and the identity of each alteration. Alterations from organisms other than Escherichia coli are reported at positions according to the E.coli numbering system. Information provided for each mutation includes: (i) a brief description of the phenotype(s) associated with each mutation, (ii) whether a mutant phenotype has been detected by in vivo or in vitro methods, and (iii) relevant literature citations. The databases are available via ftp and on the World Wide Web at the following URL: http: //www.fandm.edu/Departments/Biology/Databases/RNA.h tmlKeywords
This publication has 28 references indexed in Scilit:
- Phenotypic heterogeneity of mutational changes at a conserved nucleotide in 16 s ribosomal RNAJournal of Molecular Biology, 1997
- Decoding fidelity at the ribosomal A and P sites: influence of mutations in three different regions of the decoding domain in 16S rRNANucleic Acids Research, 1997
- The RNA binding site of S8 ribosomal protein of Escherichia coli: Selex and hydroxyl radical probing studies.1997
- Mutations at nucleotides G2251 and U2585 of 23 S rRNA perturb the peptidyl transferase center of the ribosomeJournal of Molecular Biology, 1997
- Acetylation of ribosomal protein S5 affected by defects in the central pseudoknot in 16S ribosomal RNA?FEBS Letters, 1997
- Expansion of the 16S and 23S ribosomal RNA mutation databases (16SMDB and 23SMDB)Nucleic Acids Research, 1997
- The Donor Substrate Site within the Peptidyl Transferase Loop of 23 S rRNA and its Putative Interactions with the CCA-end of N-blocked Aminoacyl-tRNAPheJournal of Molecular Biology, 1996
- Conserved Nucleotides of 23 S rRNA Located at the Ribosomal Peptidyltransferase CenterJournal of Biological Chemistry, 1996
- Functional Effects of Mutating the Closing G·A Base-pair of a Conserved Hairpin Loop in 23 S Ribosomal RNAJournal of Molecular Biology, 1996
- The central pseudoknot in 16S ribosomal RNA is needed for ribosome stability but is not essential for 30S initiation complex formationNucleic Acids Research, 1996