Exploitation ofArabidopsis-tomato synteny to construct a high-resolution map of theovate-containing region in tomato chromosome 2
- 1 June 2001
- journal article
- research article
- Published by Canadian Science Publishing in Genome
- Vol. 44 (3) , 470-475
- https://doi.org/10.1139/g01-024
Abstract
High-resolution genetic and physical maps were constructed for the region of chromosome 2 containing the major fruit-shape locus ovate. A total of 3000 NIL F2and F3NILs derived from Lycopersicon esculentum cv. Yellow Pear (TA503) × L. pennellii (a wild tomato) were used to position ovate adjacent to the marker TG645 and flanked by markers TX700 and BA10R (a 0.03-cM interval). BAC libraries and a BIBAC library were screened with the closest marker, TG645. Genetic mapping with the ends of isolated BAC clones revealed that two BAC clones (100 and 140 kb) both contained the ovate locus. Screening of sequences from these BAC clones revealed synteny between this segment of tomato chromosome 2 and the chromosome-4 region of Arabidopsis containing the BAC clone ATAP22. Microsynteny between the two genomes was exploited to find additional markers near the ovate locus. The placement of ovate on a BAC clone will now allow cloning of this locus and, hence, may open the door to understanding the molecular basis of fruit development and also facilitate the genetic engineering of fruit-shape characteristics. This also represents the first time that microsynteny with Arabidopsis has been exploited for positional cloning purposes in a different plant family.Key words: map, fruit development, colinearity, positional cloning.Keywords
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