A mutant T4 lysozyme (Val 131 → Ala) designed to increase thermostability by the reduction of strain within an α‐helix
- 1 January 1990
- journal article
- research article
- Published by Wiley in Proteins-Structure Function and Bioinformatics
- Vol. 7 (2) , 198-204
- https://doi.org/10.1002/prot.340070208
Abstract
An attempt has been made to identify residues in T4 phage lyoszyme that may have strained conformations and, by appropriate site-directed replacements, to reduce this strain and thus increase the thermostability of the protein. Valine 131, within α-helix 126–134, was identified as a potential candidate. Its side-chain rotational as a potential candidate. Its side-chain rotation angle, χ1, differs by approximately 18° from the low-energy trans configuration. In addition, it is largely solvent exposed, yet is held in a rigid conformation. The mutant protein with Val 131 replaced by alanine temperature 0.9°C higher than that of wildtype lyoszyme at pH 2.8. As a control, The mutant Val 131 → Thr was also constructed and its melting temperature was found to be marginally lower than wild type. Higher-resolution crystal structure determination of the mutant lysozymes show that their structure are virtually identical with that of wild-type lyoszyme, except for the Val → Ala or Val → Thr replacement. Analysis of the different structures suggests that the design of the Val→Ala substitution was, in principle, successful, although the apparent gain in stability caused by reduction in strain is modest and is somewhat offset by the loss of hydrophobic interactions and by entrophic effects. The results also help to provide a structural retionalization that alanine has a higher helix propensity than valine or theronine.Keywords
This publication has 28 references indexed in Scilit:
- Tertiary templates for proteins: Use of packing criteria in the enumeration of allowed sequences for different structural classesPublished by Elsevier ,2005
- The interpretation of protein structures: Estimation of static accessibilityPublished by Elsevier ,2004
- Effect of the substitution Ala .fwdarw. Gly at each of five residue positions in the C-peptide helixBiochemistry, 1989
- Analysis of the relationship between side-chain conformation and secondary structure in globular proteinsJournal of Molecular Biology, 1987
- Structural studies of mutants of the lysozyme of bacteriophage T4Journal of Molecular Biology, 1987
- An efficient general-purpose least-squares refinement program for macromolecular structuresActa Crystallographica Section A Foundations of Crystallography, 1987
- Structure of bacteriophage T4 lysozyme refined at 1.7 Å resolutionJournal of Molecular Biology, 1987
- Helix-coil stability constants for the naturally occurring amino acids in water. 22. Histidine parameters from random poly[(hydroxybutyl)glutamine-co-L-histidine]Macromolecules, 1984
- Conformation of amino acid side-chains in proteinsJournal of Molecular Biology, 1978
- Energy refinement of hen egg-white lysozymeJournal of Molecular Biology, 1974