DNA rearrangement and restriction fragment length polymorphism within the first BCR intron in philadelphia‐positive acute leukemia

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Abstract
In some patients with Philadelphia (Ph)‐chromosome positive acute lymphoblastic leukemias, breakpoints on chromosome 22 are reported to occur within the first BCR intron. To analyze the breakpoints in chromosome 22 of Ph‐positive acute leukemia patients without rearrangement of the 5.8 kb bcr, we cloned the 3′ part of the first BCR intron using a synthetic DNA probe. During the course of study, we mapped the region of the deletion/insertion of 1 kb that causes a restriction fragment length polymorphism (RFLP) and found a racial difference in the frequencies of the alleles giving rise to this RFLP. Analyses of the patients' samples indicated that breakpoints were located within the 8.5 kb EcoRI fragment of the first BCR intron in two of five Ph‐positive acute leukemia patients. The data, together with the previous reports, indicate that breakpoints within this ∼50 kb intron are widely scattered, in contrast to those confined within the 5.8 kb bcr in chronic myelogenous leukemias.