The change in hydrogen bond strength accompanying charge rearrangement: Implications for enzymatic catalysis
- 10 December 1996
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 93 (25) , 14474-14479
- https://doi.org/10.1073/pnas.93.25.14474
Abstract
The equilibrium for formation of the intramolecular hydrogen bond (K HB ) in a series of substituted salicylate monoanions was investigated as a function of ΔpK a , the difference between the pK a values of the hydrogen bond donor and acceptor, in both water and dimethyl sulfoxide. The dependence of log K HB upon ΔpK a is linear in both solvents, but is steeper in dimethyl sulfoxide (slope = 0.73) than in water (slope = 0.05). Thus, hydrogen bond strength can undergo substantially larger increases in nonaqueous media than aqueous solutions as the charge density on the donor or acceptor atom increases. These results support a general mechanism for enzymatic catalysis, in which hydrogen bonding to a substrate is strengthened as charge rearranges in going from the ground state to the transition state; the strengthening of the hydrogen bond would be greater in a nonaqueous enzymatic active site than in water, thus providing a rate enhancement for an enzymatic reaction relative to the solution reaction. We suggest that binding energy of an enzyme is used to fix the substrate in the low-dielectric active site, where the strengthening of the hydrogen bond in the course of a reaction is increased.Keywords
This publication has 40 references indexed in Scilit:
- Molecular Recognition of Enolates of Active Methylene Compounds in Acetonitrile. The Interplay between Complementarity and Basicity and the Use of Hydrogen Bonding to Lower Guest pKasJournal of the American Chemical Society, 1995
- Exceptional active site H-bonding in enzymes? Significance of the ‘oxyanion hole’ in the serine proteases from a model studyJournal of the Chemical Society, Perkin Transactions 2, 1995
- Low-Barrier Hydrogen Bonds and Enzymic CatalysisScience, 1994
- A Low-Barrier Hydrogen Bond in the Catalytic Triad of Serine ProteasesScience, 1994
- Understanding the rates of certain enzyme-catalyzed reactions: Proton abstraction from carbon acids, acyl transfer reactions, and displacement reactions of phosphodiestersBiochemistry, 1993
- Hydrogen bonding between solutes in aqueous solutionJournal of the American Chemical Society, 1986
- A new NMR method for measuring the difference between corresponding proton and deuterium chemical shifts. Isotope effects on exchange equilibriaJournal of the American Chemical Society, 1984
- Acidities and hydrogen bonding of phenols in dimethyl sulfoxideThe Journal of Organic Chemistry, 1984
- Influence of substituents and solvent on the proton-transfer equilibria in an intramolecular hydrogen bond with large proton polarizability. Infrared and nuclear magnetic resonance resultsThe Journal of Physical Chemistry, 1983
- Equilibriums involving organic anions in dimethyl sulfoxide and N-methylpyrrolidin-2-one: acidities, ion pairing, and hydrogen bondingThe Journal of Organic Chemistry, 1980