pKa measurements from nuclear magnetic resonance of tyrosine-150 in class C beta-lactamase
Open Access
- 1 April 2003
- journal article
- Published by Portland Press Ltd. in Biochemical Journal
- Vol. 371 (1) , 175-181
- https://doi.org/10.1042/bj20021447
Abstract
13C-NMR spectroscopy was used to estimate the pKa values for the Tyr150 (Y150) residue in wild-type and mutant class C β-lactamases. The tyrosine residues of the wild-type and mutant lactamases were replaced with 13C-labelled l-tyrosine ([phenol-4-13C]tyrosine) in order to observe the tyrosine residues selectively. Spectra of the wild-type and K67C mutant (Lys67→Cys) enzyme were compared with the Y150C mutant lactamase spectra to identify the signal originating from Tyr150. Titration experiments showed that the chemical shift of the Tyr150 resonance in the wild-type enzyme is almost invariant in a range of 0.1p.p.m. up to pH11 and showed that the pKa of this residue is well above 11 in the substrate-free form. According to solvent accessibility calculations on X-ray-derived structures, the phenolic oxygen of Tyr150, which is near the amino groups of Lys315 and Lys67, appears to have low solvent accessibility. These results suggest that, in the native enzyme, Tyr150 in class C β-lactamase of Citrobacter freundii GN346 is protonated and that when Tyr150 loses a proton, a proton from Lys67 would replace it. Consequently, Tyr150 would be protonated during the entire titration.Keywords
This publication has 22 references indexed in Scilit:
- Reaction of Lys-Tyr-Lys Triad Mimics with Benzylpenicillin: Insight into the Role of Tyr150 in Class C β-LactamaseBioorganic & Medicinal Chemistry Letters, 2001
- β-Secondary and Solvent Deuterium Kinetic Isotope Effects on Catalysis by the Streptomyces R61 DD-Peptidase: Comparisons with a Structurally Similar Class C β-LactamaseBiochemistry, 1999
- Effects of Buried Charged Groups on Cysteine Thiol Ionization and Reactivity in Escherichia coli Thioredoxin: Structural and Functional Characterization of Mutants of Asp 26 and Lys 57Biochemistry, 1997
- pKa Measurements from Nuclear Magnetic Resonance for the B1 and B2 Immunoglobulin G-Binding Domains of Protein G: Comparison with Calculated Values for Nuclear Magnetic Resonance and X-ray StructuresBiochemistry, 1997
- The Role of Tyrosine 150 in Catalysis of .beta.-Lactam Hydrolysis by AmpC .beta.-Lactamase from Escherichia coli Investigated by Site-Directed MutagenesisBiochemistry, 1994
- Crystallographic Structure of a Phosphonate Derivative of the Enterobacter cloacae P99 Cephalosporinase: Mechanistic Interpretation of a .beta.-Lactamase Transition-State AnalogBiochemistry, 1994
- Role of Residue Lys315 in the Mechanism of Action of the Enterobacter cloacae 908R .beta.-LactamaseBiochemistry, 1994
- Function of the conserved triad residues in the class C β‐lactamase from Citrobacter freundii GN346FEBS Letters, 1990
- Role of lysine‐67 in the active site of class C β‐lactamase from Citrobacter freundii GN346European Journal of Biochemistry, 1990
- Refined crystal structure of β-lactamase from Citrobacter freundiiindicates a mechanism for β-lactam hydrolysisNature, 1990