Expression of genes encoding the rice translation initiation factor, eIF5A, is involved in developmental and environmental responses
- 13 April 2004
- journal article
- Published by Wiley in Physiologia Plantarum
- Vol. 121 (1) , 50-57
- https://doi.org/10.1111/j.0031-9317.2004.00292.x
Abstract
Eukaryotic translation initiation factor 5 A (eIF5A) is the only cellular protein known to contain the unusual amino acid hypusine. However, the precise cellular function of eIF5A is to date unknown. In the present study, we report on the characterization of two cDNA clones encoding eIF5A in rice (Oryza sativa). Sequence analysis revealed that the two cDNAs share 93% amino acid sequence identity. Phylogenetic analysis of the eIF5A genes revealed paraphyly of OseIF5A‐1 and OseIF5A‐2. Analysis at the mRNA level has shown that OseIF5A‐1 and OseIF5A‐2 are expressed in rice leaves and panicles and high relative amounts of both genes were detected in old leaves. In addition, both OseIF5A‐1 and OseIF5A‐2 were spatially regulated during rice leaf development. In suspension‐cultured cells, the transcripts of OseIF5A genes were strongly reduced after sugar starvation. Abiotic stresses, salt and heavy metal, induce the accumulation of OseIF5A‐1 and OseIF5A‐2 mRNAs in rice cells. These results suggested that both OseIF5A genes might be regulated by plant development and environmental stresses.Keywords
This publication has 42 references indexed in Scilit:
- Human EIF5A2 on Chromosome 3q25–q27 Is a Phylogenetically Conserved Vertebrate Variant of Eukaryotic Translation Initiation Factor 5A with Tissue-Specific ExpressionGenomics, 2001
- DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis.Bioinformatics, 1999
- Differential Expression of Genes for Cyclin-Dependent Protein Kinases in Rice Plants1Plant Physiology, 1999
- Carbohydrate Starvation Stimulates Differential Expression of Rice α-Amylase Genes That Is Modulated through Complicated Transcriptional and Posttranscriptional ProcessesJournal of Biological Chemistry, 1996
- Expression of α‐amylases, carbohydrate metabolism, and autophagy in cultured rice cells is coordinately regulated by sugar nutrientThe Plant Journal, 1994
- Global change of gene expression at late G1/S boundary may occur in human IMR‐90 diploid fibroblasts during senescenceJournal of Cellular Physiology, 1994
- Determination and mutational analysis of the phosphorylation site in the hypusine‐containing protein Hyp2pFEBS Letters, 1993
- The archaebacterial hypusine‐containing proteinEuropean Journal of Biochemistry, 1992
- A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequencesJournal of Molecular Evolution, 1980
- Generation Time and Genomic Evolution in PrimatesScience, 1973