Proton Migration and Tautomerism in Protonated Triglycine
- 7 March 2001
- journal article
- research article
- Published by American Chemical Society (ACS) in Journal of the American Chemical Society
- Vol. 123 (13) , 3006-3012
- https://doi.org/10.1021/ja0015904
Abstract
Proton migration in protonated glycylglycylglycine (GGG) has been investigated by using density functional theory at the B3LYP/6-31++G(d,p) level of theory. On the protonated GGG energy hypersurface 19 critical points have been characterized, 11 as minima and 8 as first-order saddle points. Transition state structures for interconversion between eight of these minima are reported, starting from a structure in which there is protonation at the amino nitrogen of the N-terminal glycyl residue following the migration of the proton until there is fragmentation into protonated 2-aminomethyl-5-oxazolone (the b2 ion) and glycine. Individual free energy barriers are small, ranging from 4.3 to 18.1 kcal mol-1. The most favorable site of protonation on GGG is the carbonyl oxygen of the N-terminal residue. This isomer is stabilized by a hydrogen bond of the type O−H···N with the N-terminal nitrogen atom, resulting in a compact five-membered ring. Another oxygen-protonated isomer with hydrogen bonding of the type O−H···O, resulting in a seven-membered ring, is only 0.1 kcal mol-1 higher in free energy. Protonation on the N-terminal nitrogen atom produces an isomer that is about 1 kcal mol-1 higher in free energy than isomers resulting from protonation on the carbonyl oxygen of the N-terminal residue. The calculated energy barrier to generate the b2 ion from protonated GGG is 32.5 kcal mol-1 via TS(6→7). The calculated basicity and proton affinity of GGG from our results are 216.3 and 223.8 kcal mol-1, respectively. These values are 3−4 kcal mol-1 lower than those from previous calculations and are in excellent agreement with recently revised experimental values.This publication has 47 references indexed in Scilit:
- Intramolecular proton transfer in monohydrated tautomers of cytosine: An ab initio post-Hartree-Fock studyInternational Journal of Quantum Chemistry, 1998
- Are peptides without basic residues protonated primarily at the amino terminus?International Journal of Mass Spectrometry and Ion Processes, 1998
- Linear and Cyclic Clusters of Hydrogen Cyanide and Cyanoacetylene: A Comparative ab Initio and Density Functional Study on Cooperative Hydrogen BondingThe Journal of Physical Chemistry, 1996
- Water-Catalyzed Interconversion of Conventional and Distonic Radical Cations: Methanol and Methyleneoxonium Radical CationsJournal of the American Chemical Society, 1996
- A linear free‐energy correlation in the low‐energy tandem mass spectra of protonated tripeptides Gly–Gly–XxxJournal of Mass Spectrometry, 1994
- Tandem mass spectrometry of peptides: Mechanistic aspects and structural information based on neutral losses. II—Tri‐ and larger peptidesJournal of Mass Spectrometry, 1994
- Tandem mass spectral decompositions of protonatedN-acyloligoalanines andN-acyloligoglycines as models for those of the protonated free oligopeptidesJournal of Mass Spectrometry, 1993
- Gas-phase analogs of cage effectsAccounts of Chemical Research, 1993
- Isomers of C2H4Cl+: structures, frequencies, and energeticsJournal of the American Chemical Society, 1993
- Proton transport in the catalyzed gas-phase isomerization of protonated moleculesInternational Journal of Mass Spectrometry and Ion Processes, 1992