Conformational changes in the globin family during evolution
- 1 November 1984
- journal article
- research article
- Published by Springer Nature in Journal of Molecular Evolution
- Vol. 21 (1) , 42-53
- https://doi.org/10.1007/bf02100626
Abstract
Conformational restrictions imposed on the fixation of insertions and deletions by the three-dimensional structure of globins during evolution are analyzed. An evolutionary tree for the primary structure of 38 taxonomically distant globins was constructed by a computer method. Based on this tree, the calculated fixation frequency of point mutations was 50-fold higher than that established jointly for deletions and insertions, and the fixation frequency of deletions was more than three times that established for insertions. It was also found that deletions and insertions are predominantly fixed in the interhelical sections and at the ends of the α-helices of the globin molecules. Conformational analysis of the packing of the α-helices in the spatial structure of globins demonstrated that the fixation of deletions and insertions in the center of an α-helix produces a marked distortion of their normal packing. The possible role of deletions and insertions in the evolution of protein families is discussed.This publication has 37 references indexed in Scilit:
- The interpretation of protein structures: Total volume, group volume distributions and packing densityPublished by Elsevier ,2004
- The primary structure of carp myoglobin in the context of molecular evolutionPhilosophical Transactions of the Royal Society of London. B, Biological Sciences, 1982
- Structure of the l-arabinose-binding protein from Escherichia coli at 2.4 Å resolutionJournal of Molecular Biology, 1981
- Structure of actinidin, after refinement at 1.7 Å resolutionJournal of Molecular Biology, 1980
- How different amino acid sequences determine similar protein structures: The structure and evolutionary dynamics of the globinsJournal of Molecular Biology, 1980
- Molecular structure of the α-lytic protease from Myxobacter 495 at 2·8 Å resolutionJournal of Molecular Biology, 1979
- Gene duplications in the structural evolution of chymotrypsinJournal of Molecular Biology, 1979
- Similarities in active center geometries of zinc-containing enzymes, proteases and dehydrogenasesJournal of Molecular Biology, 1978
- Primitive haemoglobinJournal of Molecular Evolution, 1977
- A general method applicable to the search for similarities in the amino acid sequence of two proteinsJournal of Molecular Biology, 1970