Reorganizing the protein space at the Universal Protein Resource (UniProt)
Top Cited Papers
Open Access
- 17 November 2011
- journal article
- research article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 40 (D1) , D71-D75
- https://doi.org/10.1093/nar/gkr981
Abstract
The mission of UniProt is to support biological research by providing a freely accessible, stable, comprehensive, fully classified, richly and accurately annotated protein sequence knowledgebase, with extensive cross-references and querying interfaces. UniProt is comprised of four major components, each optimized for different uses: the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the UniProt Metagenomic and Environmental Sequence Database. A key development at UniProt is the provision of complete, reference and representative proteomes. UniProt is updated and distributed every 4 weeks and can be accessed online for searches or download at http://www.uniprot.org.Keywords
This publication has 12 references indexed in Scilit:
- Representative Proteomes: A Stable, Scalable and Unbiased Proteome Set for Sequence Analysis and Functional AnnotationPLOS ONE, 2011
- A new bioinformatics analysis tools framework at EMBL-EBINucleic Acids Research, 2010
- A guide to the Proteomics Identifications Database proteomics data repositoryProteomics, 2009
- Infrastructure for the life sciences: design and implementation of the UniProt websiteBMC Bioinformatics, 2009
- Protein segment finder: an online search engine for segment motifs in the PDBNucleic Acids Research, 2009
- Ensembl 2009Nucleic Acids Research, 2008
- InterPro: the integrative protein signature databaseNucleic Acids Research, 2008
- UniRef: comprehensive and non-redundant UniProt reference clustersBioinformatics, 2007
- NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteinsNucleic Acids Research, 2007
- The International Protein Index: An integrated database for proteomics experimentsProteomics, 2004