The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms
Open Access
- 17 December 2004
- journal article
- research article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 33 (Database ) , D567-D572
- https://doi.org/10.1093/nar/gki104
Abstract
The Human Anatomic Gene Expression Library (H-ANGEL) is a resource for information concerning the anatomical distribution and expression of human gene transcripts. The tool contains protein expression data from multiple platforms that has been associated with both manually annotated full-length cDNAs from H-InvDB and RefSeq sequences. Of the H-Inv predicted genes, 18 897 have associated expression data generated by at least one platform. H-ANGEL utilizes categorized mRNA expression data from both publicly available and proprietary sources. It incorporates data generated by three types of methods from seven different platforms. The data are provided to the user in the form of a web-based viewer with numerous query options. H-ANGEL is updated with each new release of cDNA and genome sequence build. In future editions, we will incorporate the capability for expression data updates from existing and new platforms. H-ANGEL is accessible at http://www.jbirc.aist.go.jp/hinv/h-angel/ .Keywords
This publication has 28 references indexed in Scilit:
- The Contribution of Exon-Skipping Events on Chromosome 22 to Protein Coding DiversityGenome Research, 2001
- Genome-wide detection of alternative splicing in expressed sequences of human genesNucleic Acids Research, 2001
- Quantitative Assessment of DNA Microarrays—Comparison with Northern Blot AnalysesGenomics, 2001
- Direct Comparison of GeneChip and SAGE on the Quantitative Accuracy in Transcript Profiling AnalysisGenomics, 2000
- Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arraysNature Biotechnology, 2000
- Cloning and expression of human TRAAK, a polyunsaturated fatty acids‐activated and mechano‐sensitive K+ channelFEBS Letters, 2000
- BodyMap: a human and mouse gene expression databaseNucleic Acids Research, 2000
- Frequent Alternative Splicing of Human GenesGenome Research, 1999
- Expression Profiling by iAFLP: A PCR-Based Method for Genome-Wide Gene Expression ProfilingGenome Research, 1999
- The Genexpress IMAGE Knowledge Base of the Human Muscle Transcriptome: A Resource of Structural, Functional, and Positional Candidate Genes for Muscle Physiology and PathologiesGenome Research, 1999