Gated Binding of Ligands to HIV-1 Protease: Brownian Dynamics Simulations in a Coarse-Grained Model
- 1 June 2006
- journal article
- Published by Elsevier in Biophysical Journal
- Vol. 90 (11) , 3880-3885
- https://doi.org/10.1529/biophysj.105.074575
Abstract
No abstract availableKeywords
This publication has 45 references indexed in Scilit:
- Finite concentration effects on diffusion-controlled reactionsThe Journal of Chemical Physics, 2004
- The emerging structural understanding of transglutaminase 3Journal of Structural Biology, 2004
- Mapping Atomistic to Coarse-Grained Polymer Models Using Automatic Simplex Optimization To Fit Structural PropertiesMacromolecules, 2001
- Mapping the Pathways for O2 Entry Into and Exit from MyoglobinJournal of Biological Chemistry, 2001
- The Emerging Three‐Dimensional Structure of a ReceptorEuropean Journal of Biochemistry, 1996
- Simulation of enzyme–substrate encounter with gated active sitesNature Structural & Molecular Biology, 1994
- Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian dynamics programComputer Physics Communications, 1991
- Brownian dynamics simulation of diffusion-influenced bimolecular reactionsThe Journal of Chemical Physics, 1984
- Helix–coil transitions in a simple polypeptide modelBiopolymers, 1980
- The protein data bank: A computer-based archival file for macromolecular structuresJournal of Molecular Biology, 1977