Moving marks: Dynamic histone modifications in yeast
- 26 July 2007
- journal article
- review article
- Published by Royal Society of Chemistry (RSC) in Molecular BioSystems
- Vol. 3 (9) , 590-597
- https://doi.org/10.1039/b703923a
Abstract
Posttranslational modifications of histones, both in the tails and in the globular cores, alter the functional landscape of chromatin by modulating DNA accessibility and chromatin stability, and by providing an enormous variety of alternative interaction surfaces for trans-acting factors. Complex patterns of acetylation, methylation, phosphorylation, ubiquitylation (and others) result in spatial domains of meaningful chromatin modifications, often referred to as the histone code. Whole genome studies have uncovered striking genome-wide patterns of specific modifications, and individual modifications have been linked to a variety of functional consequences for transcription, replication and repair. A key aspect of the role of histone modifications, however, is their dynamic nature—the precise timing of the addition and removal of specific marks is an essential part of the histone code. This review will highlight examples from budding yeast that illustrate the importance of these dynamic modifications in controlling transcription and repair.Keywords
This publication has 97 references indexed in Scilit:
- Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcriptionGenes & Development, 2007
- Interplay between Chromatin and trans-Acting Factors on the IME2 Promoter upon Induction of the Gene at the Onset of MeiosisMolecular and Cellular Biology, 2007
- Displacement of Histones at Promoters of Saccharomyces cerevisiae Heat Shock Genes Is Differentially Associated with Histone H3 AcetylationMolecular and Cellular Biology, 2006
- Interplay between Ino80 and Swr1 chromatin remodeling enzymes regulates cell cycle checkpoint adaptationin response to DNA damageGenes & Development, 2006
- Genome-wide patterns of histone modifications in yeastNature Reviews Molecular Cell Biology, 2006
- Recruitment of the Type B Histone Acetyltransferase Hat1p to Chromatin Is Linked to DNA Double-Strand BreaksMolecular and Cellular Biology, 2006
- Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modificationsGenes & Development, 2006
- Histone H3 Methylation by Set2 Directs Deacetylation of Coding Regions by Rpd3S to Suppress Spurious Intragenic TranscriptionCell, 2005
- Single-Nucleosome Mapping of Histone Modifications in S. cerevisiaePLoS Biology, 2005
- Distribution and Dynamics of Chromatin Modification Induced by a Defined DNA Double-Strand BreakCurrent Biology, 2004