Structural and Mechanistic Implications of the Amino Acid Sequence of Calcium‐Transporting ATPases
- 28 September 2007
- book chapter
- Published by Wiley
- Vol. 122, 93-119
- https://doi.org/10.1002/9780470513347.ch7
Abstract
Work is reviewed in which the amino acid sequences of two Ca2+-transporting ATPases of sarcoplasmic reticulum (SR) from slow (or cardiac) and fast skeletal muscle were determined from the nucleotide sequences of cloned cDNAs. Analysis of hydrophobicity and secondary structure, combined with the known shape derived from electron micrographs, leads to a model of five domains with functional implications. The major globular part of the molecule is in the cytoplasm and consists of one antiparallel and two parallel β-sheet domains. One of the latter binds ATP, which, in the presence of Ca2+, phosphorylates an aspartic acid on the other domain. It is proposed that subsequent kinase-like movements are transmitted to the SR membrane via a penta-helical, calcium-binding stalk. The Ca2+ is first trapped and then translocated via the ten helices which constitute the transmembrane (channel) region. The difference in requirements for counter ions between the Ca2+- and Na+/K+-ATPases can be explained in terms of differing charge distributions in this channel.Keywords
This publication has 42 references indexed in Scilit:
- Sarcoplasmic reticulum contains adenine nucleotide-activated calcium channelsNature, 1985
- Phosphate‐binding sequences in nucleotide‐binding proteinsFEBS Letters, 1985
- GTP enhances inositol trisphosphate‐stimulated Ca2+ release from rat liver microsomesFEBS Letters, 1985
- Photoreceptor excitation and adaptation by inositol 1,4,5-trisphosphateNature, 1984
- Structure of the vanadate-induced crystals of sarcoplasmic reticulum Ca2+-ATPaseJournal of Molecular Biology, 1984
- Separation of the tryptic fragments of sarcoplasmic reticulum ATPase with high performance liquid chromatographyFEBS Letters, 1984
- The sarcoplasmic reticulum calcium pumpFEBS Letters, 1984
- Shape and thermodynamic parameters of a Ca2+-dependent ATPase: A solution X-ray scattering and sedimentation equilibrium studyJournal of Molecular Biology, 1981
- Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteinsJournal of Molecular Biology, 1978