Adaptations to fluctuating selection in Drosophila
- 13 February 2007
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 104 (7) , 2277-2282
- https://doi.org/10.1073/pnas.0607105104
Abstract
Time-dependent selection causes the adaptive evolution of new phenotypes, and this dynamics can be traced in genomic data. We have analyzed polymorphisms and substitutions in Drosophila, using a more sensitive inference method for adaptations than the standard population-genetic tests. We find evidence that selection itself is strongly time-dependent, with changes occurring at nearly the rate of neutral evolution. At the same time, higher than previously estimated levels of selection make adaptive responses by a factor 10-100 faster than the pace of selection changes, ensuring that adaptations are an efficient mode of evolution under time-dependent selection. The rate of selection changes is faster in noncoding DNA, i.e., the inference of functional elements can less be based on sequence conservation than for proteins. Our results suggest that selection acts not only as a constraint but as a major driving force of genomic change.Keywords
This publication has 43 references indexed in Scilit:
- Darwinian Evolution Can Follow Only Very Few Mutational Paths to Fitter ProteinsScience, 2006
- Approximate Bayesian Inference Reveals Evidence for a Recent, Severe Bottleneck in a Netherlands Population of Drosophila melanogasterGenetics, 2006
- Adaptive evolution of non-coding DNA in DrosophilaNature, 2005
- The genetic theory of adaptation: a brief historyNature Reviews Genetics, 2005
- Evidence for Widespread Degradation of Gene Control Regions in Hominid GenomesPLoS Biology, 2005
- Pervasive joint influence of epistasis and plasticity on mutational effects in Escherichia coliNature Genetics, 2004
- Testing the neutral theory of molecular evolution with genomic data from DrosophilaNature, 2002
- Transition between Stochastic Evolution and Deterministic Evolution in the Presence of Selection: General Theory and Application to VirologyMicrobiology and Molecular Biology Reviews, 2001
- Neutral Evolution of Model Proteins: Diffusion in Sequence Space and OverdispersionJournal of Theoretical Biology, 1999
- Adaptive protein evolution at the Adh locus in DrosophilaNature, 1991