Rapid Identification of Clinically Relevant Legionella spp. by Analysis of Transfer DNA Intergenic Spacer Length Polymorphism
Open Access
- 1 January 2001
- journal article
- research article
- Published by American Society for Microbiology in Journal of Clinical Microbiology
- Vol. 39 (1) , 162-169
- https://doi.org/10.1128/jcm.39.1.162-169.2001
Abstract
Analysis of PCR-amplified transfer DNA (tDNA) intergenic spacers was evaluated as a rapid method for identification to the species level of 18 species of Legionella known as human pathogens. Type strains ( n = 19), reference strains ( n = 16), environmental strains ( n = 31), and clinical strains ( n = 32) were tested. PCR products using outwardly directed tDNA consensus primers were separated on polyacrylamide gels and analyzed with automated laser fluorescence. Test results were obtained in 8 h starting with 72-h-old bacterial growth on solid medium. Species-specific patterns were obtained for all 18 Legionella species tested: Legionella anisa , L. bozemanii serogroups 1 and 2, L. cincinnatiensis , L. dumoffii , L. feeleii serogroups 1 and 2, L. gormanii , L. hackeliae serogroups 1 and 2, L. jordanis , L. lansingensis , L. longbeachae serogroups 1 and 2, L. lytica , L. maceachernii , L. micdadei , L. oakridgensis , L. parisiensis , L. pneumophila serogroups 1 to 14, L. sainthelensi serogroup 2, L. tucsonensis , and L. wadsworthii . Computer-assisted matching of tDNA-intergenic length polymorphism (ILP) patterns identified all 63 environmental and clinical strains to the species level and to serogroup for some strains. tDNA-ILP analysis is proposed as a routinely applicable method which allows rapid identification of environmental and clinical isolates of Legionella spp. associated with legionellosis.Keywords
This publication has 15 references indexed in Scilit:
- Identification of clinically relevant viridans streptococci by analysis of transfer DNA intergenic spacer length polymorphismInternational Journal of Systematic and Evolutionary Microbiology, 1999
- An evaluation of intergenic rRNA gene sequence length polymorphism analysis for the identification of Legionella speciesJournal of Medical Microbiology, 1998
- Species identification of Legionella via intergenic 16S-23S ribosomal spacer PCR analysisInternational Journal of Systematic and Evolutionary Microbiology, 1998
- Comparison of PCR-based DNA fingerprinting techniques for the identification of Listeria species and their use for atypical Listeria isolatesInternational Journal of Systematic and Evolutionary Microbiology, 1998
- Phylogeny of Legionellaceae Based on Small-Subunit Ribosomal DNA Sequences and Proposal of Legionella lytica comb. nov. for Legionella-Like Amoebal PathogensInternational Journal of Systematic and Evolutionary Microbiology, 1996
- Characterization of Legionella Species by Numerical Analysis of Whole-Cell Protein ElectrophoresisInternational Journal of Systematic and Evolutionary Microbiology, 1996
- Taxonomy and typing of legionellaeReviews in Medical Microbiology, 1994
- The use of 16S ribosomal RNA analyses to investigate the phylogeny of the family LegionellaceaeJournal of General Microbiology, 1991
- Rapid extraction of bacterial genomic DNA with guanidium thiocyanateLetters in Applied Microbiology, 1989
- Identification of Species of the Genus Legionella Using a Cloned rRNA Gene from Legionella pneumophilaMicrobiology, 1988