Parameter estimate of signal transduction pathways
Open Access
- 30 October 2006
- journal article
- review article
- Published by Springer Nature in BMC Neuroscience
- Vol. 7 (S1) , S6
- https://doi.org/10.1186/1471-2202-7-s1-s6
Abstract
The "inverse" problem is related to the determination of unknown causes on the bases of the observation of their effects. This is the opposite of the corresponding "direct" problem, which relates to the prediction of the effects generated by a complete description of some agencies. The solution of an inverse problem entails the construction of a mathematical model and takes the moves from a number of experimental data. In this respect, inverse problems are often ill-conditioned as the amount of experimental conditions available are often insufficient to unambiguously solve the mathematical model. Several approaches to solving inverse problems are possible, both computational and experimental, some of which are mentioned in this article. In this work, we will describe in details the attempt to solve an inverse problem which arose in the study of an intracellular signaling pathway.Keywords
This publication has 88 references indexed in Scilit:
- Faster and more accurate global protein function assignment from protein interaction networks using the MFGO algorithmFEBS Letters, 2006
- Minimum information requested in the annotation of biochemical models (MIRIAM)Nature Biotechnology, 2005
- Modelling the evolution of genetic regulatory networksJournal of Theoretical Biology, 2005
- Predicting Functional Gene Links from Phylogenetic-Statistical Analyses of Whole GenomesPLoS Computational Biology, 2005
- A proteomic approach to tumour target identification using phage display, affinity purification and mass spectrometryEuropean Journal Of Cancer, 2005
- IntAct: an open source molecular interaction databaseNucleic Acids Research, 2004
- The Database of Interacting Proteins: 2004 updateNucleic Acids Research, 2004
- Global protein function prediction from protein-protein interaction networksNature Biotechnology, 2003
- Signalling mechanismsCurrent Opinion in Neurobiology, 2001
- A comprehensive two-hybrid analysis to explore the yeast protein interactomeProceedings of the National Academy of Sciences, 2001