Structure of tbe gene forXenopustranscription factor TMIIIA
- 1 January 1986
- journal article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 14 (5) , 2187-2200
- https://doi.org/10.1093/nar/14.5.2187
Abstract
The eucaryotic transcription factor TFIIIA is required for 5S RNA transcription in Xenopus, and changes in the level of TFIIIA have been implicated in the differential expression of 5S RNA genes. In this paper, we report the isolation and sequencing of the X. laevis TFIIIA gene. The gene is approximately 11 kb in length and consists of 9 coding segments separated by 8 introns. A sequence of 30 amino acid residues is known to repeat imperfectly 9 times in tandem within the TFIIIA protein, and Miller et al. (EMBO J. 4, 1609-1614, 1985) proposed that TFIIIA evolved by duplication of a primordial 30 amino acid residue unit. Our results from DNA sequence analysis support their proposal by showing that some of the exon-intron boundaries correspond closely to the repeating unit. We also found that the 5' flanking sequence of the TFIIIA gene contains a TATA box (TATATAA) at position -32 and a CAAT box (GCCAATCC) at position -96 and that the site of polyadenylation is 255 residues 3' of the stop codon. Finally, we have shown that the coding sequence of the TFIIIA gene is significantly polymorphic.Keywords
This publication has 20 references indexed in Scilit:
- Detection of specific sequences among DNA fragments separated by gel electrophoresisPublished by Elsevier ,2006
- A positive transcription factor controls the differential expression of two 5S RNA genesCell, 1985
- The primary structure of transcription factor TFIIIA has 12 consecutive repeatsFEBS Letters, 1985
- Xenopus 5S gene transcription factor, TFIIIA: Characterization of a cDNA clone and measurement of RNA levels throughout developmentCell, 1984
- Analysis of Biological Sequences on Small ComputersDNA, 1984
- Domains of the positive transcription factor specific for the Xenopus 5S RNA geneCell, 1984
- Are U4 small nuclear ribonucleoproteins involved in polyadenylation?Nature, 1984
- Transcription of Class III Genes: Formation of Preinitiation ComplexesScience, 1983
- Assembly of transcriptionally active 5S RNA gene chromatin in vitroCell, 1982
- Screening λgt Recombinant Clones by Hybridization to Single Plaques in SituScience, 1977