A multi-template combination algorithm for protein comparative modeling
Open Access
- 1 January 2008
- journal article
- research article
- Published by Springer Nature in BMC Structural Biology
- Vol. 8 (1) , 18
- https://doi.org/10.1186/1472-6807-8-18
Abstract
Multiple protein templates are commonly used in manual protein structure prediction. However, few automated algorithms of selecting and combining multiple templates are available.Keywords
This publication has 90 references indexed in Scilit:
- LOMETS: A local meta-threading-server for protein structure predictionNucleic Acids Research, 2007
- SWISS-MODEL: an automated protein homology-modeling serverNucleic Acids Research, 2003
- T-coffee: a novel method for fast and accurate multiple sequence alignment 1 1Edited by J. ThorntonJournal of Molecular Biology, 2000
- Modeling of loops in protein structuresProtein Science, 2000
- The Protein Data BankNucleic Acids Research, 2000
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997
- SWISS‐MODEL and the Swiss‐Pdb Viewer: An environment for comparative protein modelingElectrophoresis, 1997
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceNucleic Acids Research, 1994
- Comparative Protein Modelling by Satisfaction of Spatial RestraintsJournal of Molecular Biology, 1993
- Knowledge-based prediction of protein structures and the design of novel moleculesNature, 1987