Toward interoperable bioscience data
Top Cited Papers
Open Access
- 27 January 2012
- journal article
- research article
- Published by Springer Nature in Nature Genetics
- Vol. 44 (2) , 121-126
- https://doi.org/10.1038/ng.1054
Abstract
To make full use of research data, the bioscience community needs to adopt technologies and reward mechanisms that support interoperability and promote the growth of an open 'data commoning' culture. Here we describe the prerequisites for data commoning and present an established and growing ecosystem of solutions using the shared 'Investigation-Study-Assay' framework to support that vision.Keywords
This publication has 33 references indexed in Scilit:
- The BioPAX community standard for pathway data sharingNature Biotechnology, 2010
- ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community levelBioinformatics, 2010
- Archiving next generation sequencing dataNucleic Acids Research, 2009
- The Proteomics Identifications database: 2010 updateNucleic Acids Research, 2009
- Prepublication data sharingNature, 2009
- ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expressionNucleic Acids Research, 2009
- NCBI GEO: archive for high-throughput functional genomic dataNucleic Acids Research, 2009
- The future of biocurationNature, 2008
- Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI projectNature Biotechnology, 2008
- The OBO Foundry: coordinated evolution of ontologies to support biomedical data integrationNature Biotechnology, 2007