Oligomerization of Hantavirus Nucleocapsid Protein: Analysis of the N-Terminal Coiled-Coil Domain
Open Access
- 15 September 2006
- journal article
- research article
- Published by American Society for Microbiology in Journal of Virology
- Vol. 80 (18) , 9073-9081
- https://doi.org/10.1128/jvi.00515-06
Abstract
Hantaviruses constitute a genus in the family Bunyaviridae. They are enveloped negative-strand RNA viruses with a tripartite genome encoding the nucleocapsid (N) protein, the two surface glycoproteins Gn and Gc, and an RNA-dependent RNA polymerase. The N protein is the most abundant component of the virion; it encapsidates genomic RNA segments forming ribonucleoproteins and participates in genome transcription and replication as well as virus assembly. In the course of RNA encapsidation, N protein forms intermediate trimers via head-to-head and tail-to-tail interactions. We analyzed the amino-terminal trimerization domain (amino acid residues 1 to 77) of Tula hantavirus using computer modeling, mammalian two-hybrid assay, and immunofluorescence assay. The results obtained were consistent with the existence of an antiparallel coiled-coil stabilized by interactions between hydrophobic residues. Residues L44, V51, and L58 were important for the N-N interaction; other residues, e.g., L25 and V32, also made a contribution, albeit a modest one. Our alignments of the N-terminal domain of the hantaviral N proteins suggest the coiled-coil structure, and hence the mode of N-protein oligomerization, is conserved among hantaviruses.Keywords
This publication has 46 references indexed in Scilit:
- De Novo Prediction of Three-dimensional Structures for Major Protein FamiliesJournal of Molecular Biology, 2002
- The Protein Data BankNucleic Acids Research, 2000
- Protein secondary structure prediction based on position-specific scoring matrices 1 1Edited by G. Von HeijneJournal of Molecular Biology, 1999
- Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methodsJournal of Molecular Biology, 1998
- Heteronuclear NMR assignments and secondary structure of the coiled coil trimerization domain from cartilage matrix protein in oxidized and reduced formsProtein Science, 1997
- MultiCoil: A program for predicting two‐and three‐stranded coiled coilsProtein Science, 1997
- Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and bayesian scoring functionsJournal of Molecular Biology, 1997
- Characterization of Tula virus antigenic determinants defined by monoclonal antibodies raised against baculovirus-expressed nucleocapsid proteinVirus Research, 1996
- Epitope Mapping by Label-Free Biomolecular Interaction AnalysisMethods, 1996
- Predicting Coiled Coils from Protein SequencesScience, 1991