The 1H‐NMR assignments of the aromatic resonances in complexes of Lactobacillus casei dihydrofolate reductase and the origins of their chemical shifts
- 31 July 1990
- journal article
- research article
- Published by Wiley in European Journal of Biochemistry
- Vol. 191 (3) , 659-668
- https://doi.org/10.1111/j.1432-1033.1990.tb19172.x
Abstract
All the aromatic proton resonances in the 500-MHz NMR spectra of Lactobacillus casei dihydrofolate reductase have been assigned for several of its complexes with inhibitors. For the complexes with methotrexate and trimethoprim this was achieved by using a combination of NMR techniques in conjunction with a selectively deuterated protein designed to simplify the spectra such that nuclear Overhauser effect (NOE) connections could be detected with greater ease and certainty. By correlating these NOE data with crystal structure data on related complexes it was possible to assign all the aromatic resonances and to extend these assignments to spectra of other complexes of dihydrofolate reductase. The conformation-dependent chemical shifts observed for many of the resonances could be explained qualitatively, but not quantitatively, in terms of ring-current shifts. The discrepancies between calculated ring-current shifts and the observed conformation-dependent shifts could not in general be accounted for satisfactorily in terms of carbonyl-group anisotropic shielding contributions calculated using presently available models. In the case of the H.delta.1, .delta.2 protons of Phe30 some of the discrepancy probably results from a difference in the conformation of the Phe ring between the solution and crystal sites.This publication has 54 references indexed in Scilit:
- Structural comparisons of complexes of methotrexate analogs with Lactobacillus casei dihydrofolate reductase by two dimensional proton NMR at 500 MHzBiochemistry, 1987
- Dihydrofolate reductaseJournal of Molecular Biology, 1986
- MLEV-17-based two-dimensional homonuclear magnetization transfer spectroscopyJournal of Magnetic Resonance (1969), 1985
- A proton NMR study of the interactions and conformations of rationally designed brodimoprim analogs in complexes with Lactobacillus casei dihydrofolate reductaseJournal of Medicinal Chemistry, 1984
- Multinuclear NMR characterization of two coexisting conformational states of the Lactobacillus casei dihydrofolate reductase-trimethoprim-NADP complexBiochemistry, 1984
- Secondary structure in the solution conformation of the proteinase inhibitor IIA from bull seminal plasma by nuclear magnetic resonanceJournal of Molecular Biology, 1984
- Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteinsBiochemical and Biophysical Research Communications, 1983
- Peptide group shiftsJournal of Magnetic Resonance (1969), 1982
- 13C NMR evidence for three slowly interconverting conformations of the dihydrofolate reductase-NADP+-folate complexBiochemical and Biophysical Research Communications, 1981
- Chemical Shift. V. Further Studies on the Long-range Shielding Effects of the C—H and C=O BondsCanadian Journal of Chemistry, 1971