On Monte Carlo and molecular dynamics methods inspired by Tsallis statistics: Methodology, optimization, and application to atomic clusters
- 1 December 1997
- journal article
- research article
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 107 (21) , 9117-9124
- https://doi.org/10.1063/1.475203
Abstract
Generalized Monte Carlo and molecular dynamics algorithms which provide enhanced sampling of the phase space in the calculation of equilibrium thermodynamic properties is presented. The algorithm samples trial moves from a generalized statistical distribution derived from a modification of the Gibbs–Shannon entropy proposed by Tsallis. Results for a one-dimensional model potential demonstrate that the algorithm leads to a greatly enhanced rate of barrier crossing and convergence in the calculation of equilibrium averages. Comparison is made with standard Metropolis Monte Carlo and the J-walking algorithm of Franz, Freeman and Doll. Application to a 13-atom Lennard-Jones cluster demonstrates the ease with which the algorithm may be applied to complex molecular systems.Keywords
This publication has 24 references indexed in Scilit:
- Molecular dynamics, Langevin and hydrid Monte Carlo simulations in a multicanonical ensembleChemical Physics Letters, 1996
- Quantative measure of efficiency of Monte Carlo simulationsPhysica A: Statistical Mechanics and its Applications, 1994
- Dynamics in Rugged Energy Landscapes with Applications to the S-Peptide and Ribonuclease AJournal of the American Chemical Society, 1994
- Folding of model heteropolymers by configurational-bias Monte CarloChemical Physics Letters, 1992
- Multicanonical algorithms for first order phase transitionsPhysics Letters B, 1991
- Generalized statistical mechanics: connection with thermodynamicsJournal of Physics A: General Physics, 1991
- Measures of effective ergodic convergence in liquidsThe Journal of Physical Chemistry, 1989
- New Monte Carlo technique for studying phase transitionsPhysical Review Letters, 1988
- Nonuniversal critical dynamics in Monte Carlo simulationsPhysical Review Letters, 1987
- Chaotic dynamics, semiclassical quantization, and mode-mode energy transfer: the Boulder viewThe Journal of Physical Chemistry, 1982