Comparative study of protein and mRNA expression during osteoclastogenesis
- 10 October 2005
- journal article
- research article
- Published by Wiley in Proteomics
- Vol. 5 (15) , 3868-3875
- https://doi.org/10.1002/pmic.200402059
Abstract
Osteoclasts, the bone‐digesting cells, are key players in bone remodeling. To identify proteins potentially involved in osteoclast function, we analyzed the patterns of protein expression during osteoclastogenesis by2‐D DIGE. As a model system we used the mouse myeloid Raw 264.7 cell line that differentiates in vitro into osteoclasts upon treatment with specific growth factors. In 2‐D DIGE, we identified 86 up‐ and 34 down‐regulated proteins including known osteoclast differentiation markers as well as proteins regulating key cellular functions of osteoclasts such as energy production, cytoskeleton dynamics, and digestion of organic and inorganic bone matrix. Comparison of protein expression using 2‐D DIGE techniques with mRNA expression analyzed by DNA microarrays revealed essentially two groups of genes. The first group comprises genes for which differences in both mRNA and protein expressions were found. A second group covers genes whose expression was not altered at the mRNA level but whose corresponding gene products exhibited different electrophoretic mobilities, thereby revealing potential changes in post‐transcriptional processing and PTM. Thus, these combined approaches identify new potential therapeutic targets for treatment of bone diseases and provide complementary information on regulatory processes that might affect osteoclastogenesis.Keywords
This publication has 29 references indexed in Scilit:
- Comparative proteomics of primitive hematopoietic cell populations reveals differences in expression of proteins regulating motilityBlood, 2004
- Elucidation of CPX‐1 involvement in RANKL‐induced osteoclastogenesis by a proteomics approachFEBS Letters, 2004
- Osteoclast differentiation and activationNature, 2003
- Analysis of class I phosphoinositide 3‐kinase autophosphorylation sites by mass spectrometryRapid Communications in Mass Spectrometry, 2003
- Podosomes Display Actin Turnover and Dynamic Self-Organization in Osteoclasts Expressing Actin-Green Fluorescent ProteinMolecular Biology of the Cell, 2003
- Rho GTPases in cell biologyNature, 2002
- Phosphatidylinositol 3,4,5-Trisphosphate Directs Association of Src Homology 2-containing Signaling Proteins with GelsolinJournal of Biological Chemistry, 2001
- Difference gel electrophoresis. A single gel method for detecting changes in protein extractsElectrophoresis, 1997
- Kinetics of the osteoclast cytoskeleton during the resorption cycle in vitroJournal of Bone and Mineral Research, 1991
- Evidence for the presence of a proton pump of the vacuolar H(+)-ATPase type in the ruffled borders of osteoclasts.The Journal of cell biology, 1990