GABI-Kat SimpleSearch: a flanking sequence tag (FST) database for the identification of T-DNA insertion mutants in Arabidopsis thaliana
Open Access
- 22 July 2003
- journal article
- research article
- Published by Oxford University Press (OUP) in Bioinformatics
- Vol. 19 (11) , 1441-1442
- https://doi.org/10.1093/bioinformatics/btg170
Abstract
Summary: GABI-Kat SimpleSearch is a database of flanking sequence tags (FSTs) of T-DNA mutagenized Arabidopsis thaliana lines that were generated by the GABI-Kat project. Sequences flanking the T-DNA insertion sites were aligned to the A.thaliana genome sequence, annotated with information about the FST, the insertion site and the line from which the FST was derived. A web interface permits text-based as well as sequence-based searches for relevant insertions. GABI-Kat SimpleSearch aims to help biologists to quickly find T-DNA insertion mutants for their research. Availability: http://www.mpiz-koeln.mpg.de/GABI-Kat/ Contact: weisshaa@mpiz-koeln.mpg.deKeywords
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