Species Identification of Clinical Isolates of Anaerobic Bacteria: a Comparison of Two Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry Systems
- 1 December 2011
- journal article
- research article
- Published by American Society for Microbiology in Journal of Clinical Microbiology
- Vol. 49 (12) , 4314-4318
- https://doi.org/10.1128/jcm.05788-11
Abstract
We compared two matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) systems (Shimadzu/SARAMIS and Bruker) on a collection of consecutive clinically important anaerobic bacteria (n = 290). The Bruker system had more correct identifications to the species level (67.2% versus 49.0%), but also more incorrect identifications (7.9% versus 1.4%). The system databases need to be optimized to increase identification levels. However, MALDI-TOF MS in its present version seems to be a fast and inexpensive method for identification of most clinically important anaerobic bacteria.Keywords
This publication has 16 references indexed in Scilit:
- The identification of anaerobic bacteria using MALDI-TOF MSAnaerobe, 2011
- Evaluation of the Vitek 2 ANC Card for Identification of Clinical Isolates of Anaerobic BacteriaJournal of Clinical Microbiology, 2011
- Population Genetic Analysis of Propionibacterium acnes Identifies a Subpopulation and Epidemic Clones Associated with AcnePLOS ONE, 2010
- Performance of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Bacterial Strains Routinely Isolated in a Clinical Microbiology LaboratoryJournal of Clinical Microbiology, 2010
- 16S rRNA Gene Sequencing in Routine Identification of Anaerobic Bacteria Isolated from Blood CulturesJournal of Clinical Microbiology, 2010
- High-Throughput Identification of Bacteria and Yeast by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry in Conventional Medical Microbiology LaboratoriesJournal of Clinical Microbiology, 2010
- Ongoing Revolution in Bacteriology: Routine Identification of Bacteria by Matrix‐Assisted Laser Desorption Ionization Time‐of‐Flight Mass SpectrometryClinical Infectious Diseases, 2009
- A Revolution in the Identification of Pathogens in Clinical LaboratoriesClinical Infectious Diseases, 2009
- EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequencesInternational Journal of Systematic and Evolutionary Microbiology, 2007
- How Far Should a Clinical Laboratory Go in Identifying Anaerobic Isolates, and Who Should Pay?Clinical Infectious Diseases, 1993