Characterization of the Protrimer Intermediate in the Folding Pathway of the Interdigitated β-Helix Tailspike Protein
- 29 March 2002
- journal article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 41 (16) , 5093-5103
- https://doi.org/10.1021/bi0115582
Abstract
P22 tailspike is a homotrimeric, thermostable adhesin that recognizes the O-antigen lipopolysaccharide of Salmonella typhimurium. The 70 kDa subunits include long β-helix domains. After residue 540, the polypeptide chains change their path and wrap around one another, with extensive interchain contacts. Formation of this interdigitated domain intimately couples the chain folding and assembly mechanisms. The earliest detectable trimeric intermediate in the tailspike folding and assembly pathway is the protrimer, suspected to be a precursor of the native trimer structure. We have directly analyzed the kinetics of in vitro protrimer formation and disappearance for wild type and mutant tailspike proteins. The results confirm that the protrimer intermediate is an on-pathway intermediate for tailspike folding. Protrimer was originally resolved during tailspike folding because its migration through nondenaturing polyacrylamide gels was significantly retarded with respect to the migration of the native tailspike trimer. By comparing protein mobility versus acrylamide concentration, we find that the retarded mobility of the protrimer is due exclusively to a larger overall size than the native trimer, rather than an altered net surface charge. Experiments with mutant tailspike proteins indicate that the conformation difference between protrimer and native tailspike trimer is localized toward the C-termini of the tailspike polypeptide chains. These results suggest that the transformation of the protrimer to the native tailspike trimer represents the C-terminal interdigitation of the three polypeptide chains. This late step may confer the detergent-resistance, protease-resistance, and thermostability of the native trimer.Keywords
This publication has 9 references indexed in Scilit:
- Nuclear magnetic resonance characterization of peptide models of collagen–folding diseasesPhilosophical Transactions Of The Royal Society B-Biological Sciences, 2001
- Importance of Homodimerization for the in Vivo Function of Yeast RNA TriphosphataseJournal of Biological Chemistry, 2001
- Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavageJournal of Molecular Biology, 1997
- Prevalence of temperature sensitive folding mutations in the parallel beta coil domain of the phage P22 tailspike endorhamnosidaseJournal of Molecular Biology, 1997
- Retinoid‐binding proteins: structural determinants important for functionThe FASEB Journal, 1995
- Nonlinear RegressionWiley Series in Probability and Statistics, 1989
- [13]Mutational analysis of protein folding pathways: The P22 tailspike endorhamnosidasePublished by Elsevier ,1986
- Biosynthesis of ProcollagenAnnual Review of Biochemistry, 1978
- An Algorithm for Least-Squares Estimation of Nonlinear ParametersJournal of the Society for Industrial and Applied Mathematics, 1963