Phylogenetic networks from multi-labelled trees
- 7 February 2006
- journal article
- research article
- Published by Springer Nature in Journal of Mathematical Biology
- Vol. 52 (5) , 613-632
- https://doi.org/10.1007/s00285-005-0365-z
Abstract
It is now quite well accepted that the evolutionary past of certain species is better represented by phylogenetic networks as opposed to trees. For example, polyploids are typically thought to have resulted through hybridization and duplication, processes that are probably not best represented as bifurcating speciation events. Based on the knowledge of a multi-labelled tree relating collection of polyploids, we present a canonical construction of a phylogenetic network that exhibits the tree. In addition, we prove that the resulting network is in some well-defined sense a minimal network having this property.Keywords
This publication has 11 references indexed in Scilit:
- Bounding the Number of Hybridisation Events for a Consistent Evolutionary HistoryJournal of Mathematical Biology, 2005
- Origin and Evolution of a Circumpolar Polyploid Species Complex in Silene (Caryophyllaceae) Inferred from Low Copy Nuclear RNA Polymerase Introns, rDNA, and Chloroplast DNASystematic Botany, 2005
- Phylogenetic networks: modeling, reconstructibility, and accuracyIEEE/ACM Transactions on Computational Biology and Bioinformatics, 2004
- Reconstructing reticulate evolution in speciesPublished by Association for Computing Machinery (ACM) ,2004
- Ancient Allopolyploid Speciation in Geinae (Rosaceae): Evidence from Nuclear Granule-Bound Starch Synthase (GBSSI) Gene SequencesSystematic Biology, 2003
- Ancient Allopolyploid Speciation in Geinae (Rosaceae): Evidence from Nuclear Granule-Bound Starch Synthase (GBSSI) Gene SequencesSystematic Biology, 2003
- PhylogeneticsPublished by Oxford University Press (OUP) ,2003
- TOWARDS THE DEVELOPMENT OF COMPUTATIONAL TOOLS FOR EVALUATING PHYLOGENETIC NETWORK RECONSTRUCTION METHODSPublished by World Scientific Pub Co Pte Ltd ,2002
- DigraphsPublished by Springer Nature ,2002
- Direct construction of compact directed acyclic word graphsPublished by Springer Nature ,1997