Global scientific and engineering simulations on scalar, vector and parallel LCAP-type supercomputers
- 26 September 1988
- journal article
- Published by The Royal Society in Philosophical Transactions of the Royal Society of London. Series A, Mathematical and Physical Sciences
- Vol. 326 (1591) , 445-470
- https://doi.org/10.1098/rsta.1988.0097
Abstract
We present here an example of the global simulation approach to complex systems, selecting, as example, the study of a liquid, specifically water. We start by building the molecules of the liquid from nuclei and electrons using quantum mechanics. Next we obtain the interaction potentials (two, three and four body), again by quantum mechanics. Then we use Monte Carlo and molecular dynamics to study the motions of a water molecule within its Onsager sphere, and the collective properties; subsequently we overlap fluid dynamics by considering a flow along a channel with or without obstacles; finally we extend further and report a preliminary simulation of a Benard problem, using Newton’s equations. These simulations are performed on a parallel supercomputer which we have recently assembled; the system is briefly described in the second part of this work. A number of applications in science and engineering are analysed with attention to the degree of parallelization achievable with and without special hardwares such as busses and bulk shared memory. To conclude the implication of the global simulation methodology and supercomputers evolution is discussed in terms of productivity of information.Keywords
This publication has 14 references indexed in Scilit:
- Corrosion of Iron in Molten Carbonates at 650°CJournal of the Electrochemical Society, 1987
- Hydration structure and dynamics of B‐ and Z‐DNA in the presence of counterions via molecular dynamics simulationsBiopolymers, 1987
- Molecular dynamics simulation simulation of channel flowPhysics Letters A, 1986
- Molecular-dynamics simulation of liquid water with anab initioflexible water-water interaction potentialPhysical Review A, 1986
- Molecular dynamics simulation of flow past a plateJournal of Scientific Computing, 1986
- Parallelism in computations in quantum and statistical mechanicsComputer Physics Communications, 1985
- The gramicidin A channel: comparison of the energy profiles of Na+, K+ and Cs+FEBS Letters, 1984
- Simulations of the solvent structure for macromolecules. I. Solvation of B‐DNA double helix at T = 300 KBiopolymers, 1981
- Interaction of water with DNA single and double helix in the B conformationInternational Journal of Quantum Chemistry, 1979
- Interaction of Water with DNA Single‐Helix in the A ConformationBiopolymers, 1979