Motif-Blind, Genome-Wide Discovery of cis-Regulatory Modules in Drosophila and Mouse
Open Access
- 1 October 2009
- journal article
- research article
- Published by Elsevier in Developmental Cell
- Vol. 17 (4) , 568-579
- https://doi.org/10.1016/j.devcel.2009.09.002
Abstract
No abstract availableKeywords
This publication has 44 references indexed in Scilit:
- ChIP-seq accurately predicts tissue-specific activity of enhancersNature, 2009
- REDfly 2.0: an integrated database of cis-regulatory modules and transcription factor binding sites in DrosophilaNucleic Acids Research, 2007
- JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 updateNucleic Acids Research, 2007
- Discovering transcriptional regulatory regions in Drosophila by a nonalignment method for phylogenetic footprintingProceedings of the National Academy of Sciences, 2007
- An optimized transgenesis system for Drosophila using germ-line-specific φC31 integrasesProceedings of the National Academy of Sciences, 2007
- Tissue‐specific regulatory elements in mammalian promotersMolecular Systems Biology, 2007
- In vivo enhancer analysis of human conserved non-coding sequencesNature, 2006
- Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificitiesNature Biotechnology, 2006
- Assessing computational tools for the discovery of transcription factor binding sitesNature Biotechnology, 2005
- Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genomeProceedings of the National Academy of Sciences, 2002