Systematic Coarse-Graining of Nanoparticle Interactions in Molecular Dynamics Simulation
- 19 August 2005
- journal article
- letter
- Published by American Chemical Society (ACS) in The Journal of Physical Chemistry B
- Vol. 109 (36) , 17019-17024
- https://doi.org/10.1021/jp0530496
Abstract
A recently developed multiscale coarse-graining procedure [Izvekov, S.; Voth, G. A. J. Phys. Chem. B2005, 109, 2469] is extended to derive coarse-grained models for nanoparticles. The methodology is applied to C60 and to carbonaceous nanoparticles produced in combustion environments. The coarse-graining of the interparticle force field is accomplished applying a force-matching procedure to data obtained from trajectories and forces from all-atom MD simulations. The CG models are shown to reproduce accurately the structural properties of the nanoparticle systems studied, while allowing for MD simulations of much larger self-assembled nanoparticle systems.Keywords
This publication has 21 references indexed in Scilit:
- A Multiscale Coarse-Graining Method for Biomolecular SystemsThe Journal of Physical Chemistry B, 2005
- Effective Force Field for Liquid Hydrogen Fluoride from Ab Initio Molecular Dynamics Simulation Using the Force-Matching MethodThe Journal of Physical Chemistry B, 2005
- Fast centroid molecular dynamics: A force-matching approach for the predetermination of the effective centroid forcesThe Journal of Chemical Physics, 2005
- Modeling of soot particle inception in aromatic and aliphatic premixed flamesCombustion and Flame, 2004
- Molecular Dynamics Simulation of the Formation, Structure, and Dynamics of Small Phospholipid VesiclesJournal of the American Chemical Society, 2003
- Insights into the Molecular Mechanism of Membrane Fusion from Simulation: Evidence for the Association of Splayed TailsPhysical Review Letters, 2003
- Carbon nanotubes, buckyballs, ropes, and a universal graphitic potentialPhysical Review B, 2000
- Computer simulation of surfactant solutionsCurrent Opinion in Colloid & Interface Science, 2000
- Simulations of Micelle Self-Assembly in Surfactant SolutionsLangmuir, 1996
- CHARMM: A program for macromolecular energy, minimization, and dynamics calculationsJournal of Computational Chemistry, 1983