Genome‐wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations
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- 26 September 2008
- journal article
- research article
- Published by Wiley in American Journal Of Medical Genetics Part B-Neuropsychiatric Genetics
- Vol. 147B (8) , 1345-1354
- https://doi.org/10.1002/ajmg.b.30867
Abstract
Attention deficit hyperactivity disorder (ADHD) is a complex condition with environmental and genetic etiologies. Up to this point, research has identified genetic associations with candidate genes from known biological pathways. In order to identify novel ADHD susceptibility genes, 600,000 SNPs were genotyped in 958 ADHD proband‐parent trios. After applying data cleaning procedures we examined 429,981 autosomal SNPs in 909 family trios. We generated six quantitative phenotypes from 18 ADHD symptoms to be used in genome‐wide association analyses. With the PBAT screening algorithm, we identified 2 SNPs, rs6565113 and rs552655 that met the criteria for significance within a specified phenotype. These SNPs are located in intronic regions of genes CDH13 and GFOD1, respectively. CDH13 has been implicated previously in substance use disorders. We also evaluated the association of SNPs from a list of 37 ADHD candidate genes that was specified a priori. These findings, along with association P‐values with a magnitude less than 10−5, are discussed in this manuscript. Seventeen of these candidate genes had association P‐values lower then 0.01: SLC6A1, SLC9A9, HES1, ADRB2, HTR1E, DDC, ADRA1A, DBH, DRD2, BDNF, TPH2, HTR2A, SLC6A2, PER1, CHRNA4, SNAP25, and COMT. Among the candidate genes, SLC9A9 had the strongest overall associations with 58 association test P‐values lower than 0.01 and multiple association P‐values at a magnitude of 10−5 in this gene. In sum, these findings identify novel genetic associations at viable ADHD candidate genes and provide confirmatory evidence for associations at previous candidate genes. Replication of these results is necessary in order to confirm the proposed genetic variants for ADHD.Keywords
This publication has 55 references indexed in Scilit:
- Genome‐wide association scan of attention deficit hyperactivity disorderAmerican Journal Of Medical Genetics Part B-Neuropsychiatric Genetics, 2008
- Linkage Disequilibrium Mapping of a Chromosome 15q25-26 Major Depression Linkage Region and Sequencing of NTRK3Published by Elsevier ,2008
- Newly identified genetic risk variants for celiac disease related to the immune responseNature Genetics, 2008
- Estimation of significance thresholds for genomewide association scansGenetic Epidemiology, 2008
- A high-density SNP linkage scan with 142 combined subtype ADHD sib pairs identifies linkage regions on chromosomes 9 and 16Molecular Psychiatry, 2008
- PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage AnalysesAmerican Journal of Human Genetics, 2007
- Genomewide Weighted Hypothesis Testing in Family-Based Association Studies, with an Application to a 100K ScanAmerican Journal of Human Genetics, 2007
- Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24Nature Genetics, 2007
- Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controlsNature, 2007
- Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesisNature Genetics, 2007