Crystal structure and activities of EXPB1 (Zea m 1), a β-expansin and group-1 pollen allergen from maize
- 3 October 2006
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 103 (40) , 14664-14671
- https://doi.org/10.1073/pnas.0605979103
Abstract
Expansins are small extracellular proteins that promote turgor-driven extension of plant cell walls. EXPB1 (also called Zea m 1) is a member of the beta-expansin subfamily known in the allergen literature as group-1 grass pollen allergens. EXPB1 induces extension and stress relaxation of grass cell walls. To help elucidate expansin's mechanism of wall loosening, we determined the structure of EXPB1 by x-ray crystallography to 2.75-A resolution. EXPB1 consists of two domains closely packed and aligned so as to form a long, shallow groove with potential to bind a glycan backbone of approximately 10 sugar residues. The structure of EXPB1 domain 1 resembles that of family-45 glycoside hydrolase (GH45), with conservation of most of the residues in the catalytic site. However, EXPB1 lacks a second aspartate that serves as the catalytic base required for hydrolytic activity in GH45 enzymes. Domain 2 of EXPB1 is an Ig-like beta-sandwich, with aromatic and polar residues that form a potential surface for polysaccharide binding in line with the glycan binding cleft of domain 1. EXPB1 binds to maize cell walls, most strongly to xylans, causing swelling of the cell wall. Tests for hydrolytic activity by EXPB1 with various wall polysaccharides proved negative. Moreover, GH45 enzymes and a GH45-related protein called "swollenin" lacked wall extension activity comparable to that of expansins. We propose a model of expansin action in which EXPB1 facilitates the local movement and stress relaxation of arabinoxylan-cellulose networks within the wall by noncovalent rearrangement of its target.Keywords
This publication has 77 references indexed in Scilit:
- The contribution of extensin network formation to rapid, hydrogen peroxide-mediated increases in grapevine callus wall resistance to fungal lytic enzymesJournal of Experimental Botany, 2006
- Growth of the plant cell wallNature Reviews Molecular Cell Biology, 2005
- Changes in expansin activity and gene expression during ethylene-promoted leaflet abscission in Sambucus nigraJournal of Experimental Botany, 2005
- Structural Characterisation and Functional Significance of Transient Protein–Protein InteractionsJournal of Molecular Biology, 2003
- The Protein Data BankNucleic Acids Research, 2000
- [20] Processing of X-ray diffraction data collected in oscillation modePublished by Elsevier ,1997
- Studies on the carbohydrate moieties of the timothy grass pollen allergen Phl p IElectrophoresis, 1995
- The Immunoglobulin Fold: Structural Classification, Sequence Patterns and Common CoreJournal of Molecular Biology, 1994
- The CCP4 suite: programs for protein crystallographyActa Crystallographica Section D-Biological Crystallography, 1994
- Isolation and characterization of a major cross-reactive grass group I allergenic determinantMolecular Immunology, 1989