Control of the redox potential of cytochrome and microscopic dielectric effects in proteins
- 8 April 1986
- journal article
- research article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 25 (7) , 1675-1681
- https://doi.org/10.1021/bi00355a035
Abstract
X-ray structural information provides the opportunity to explore quantitatively the relation between the microenvironments of heme proteins and their redox potentials. This can be done by considering the protein as a "solvent" for its redox center and calculating the difference between the electrostatic energy of the reduced and oxidized heme. Such calculations are presented here, applying the protein dipoles-Langevin dipoles (PDLD) model to cytochrome c. The calculations focus on an evaluation of the difference between the redox potentials to cytochrome c and the octapeptide-methionine complex formed by hydrolysis of cytochrome c. The corresponding difference (.apprx. 7 kcal/mol) is accounted for by the PDLD calculations. It is found that the protein provides basically a low dielectric environement for the heme, which destabilizes the oxidized heme (relative to its energy in water). The effect of the charge propinic acids on the heme is examined in a preliminary way. It is found that the negative charges of these groups are in a hydrophilic rather than a hydrophobic environment and that the protein-water system provides as effective high dielectric constant for their interaction with the heme. The dual nature of the dielectric effect of the cytochrome (a low dielectric constant for the self-energy of the heme and a high dielectric constant for charge-charge interactions) is discussed. The findings of this work are consistent with the difference between the folding energies of the reduced and oxidized cytochrome c.Keywords
This publication has 21 references indexed in Scilit:
- The conformation of cytochrome c in solution. Localization of a conformational difference between ferri- and ferrocytochrome c on the surface of the molecule.Journal of Biological Chemistry, 1980
- pH dependence of the redox potential of Pseudomonas aeruginosa cytochrome c-551Biochimica et Biophysica Acta (BBA) - Bioenergetics, 1980
- Coordination complexes and catalytic properties of proteins and related substances. 104. Electrostatic effects in hemoglobin: hydrogen ion equilibriums in human deoxy- and oxyhemoglobin ABiochemistry, 1979
- Energetics of enzyme catalysis.Proceedings of the National Academy of Sciences, 1978
- The electric potential field around cytochrome c and the effect of ionic strength on reaction rates of horse cytochrome cBiochimica et Biophysica Acta (BBA) - Bioenergetics, 1978
- Use of specific lysine modifications to locate the reaction site of cytochrome c with cytochrome oxidaseBiochemistry, 1977
- A theoretical model for the effects of solvent and protein dielectric on the redox potentials of iron-sulfur culstersJournal of the American Chemical Society, 1977
- Theoretical studies of enzymic reactions: Dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozymeJournal of Molecular Biology, 1976
- Complex formation between methionine and a heme peptide from cytochrome c.Proceedings of the National Academy of Sciences, 1965
- Theory of Solutions of Molecules Containing Widely Separated Charges with Special Application to ZwitterionsThe Journal of Chemical Physics, 1934