Tracking footprints of maize domestication and evidence for a massive selective sweep on chromosome 10
- 16 June 2009
- journal article
- research article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 106 (supplement) , 9979-9986
- https://doi.org/10.1073/pnas.0901122106
Abstract
Maize domestication is one of the greatest feats of artificial selection and evolution, wherein a weedy plant in Central Mexico was converted through human-mediated selection into the most productive crop in the world. In fact, the changes were so astounding that it took much of the last century to identify modern maize's true ancestor. Through modern genetic studies, the molecular basis of this evolution is being unraveled. Maize's new morphology and adaptation to diverse environments required selection at thousands of loci, and we are beginning to understand the magnitude and rates of these genetic changes. Most of the known major genes have experienced strong selection, but only small regions surrounding the selected genes exhibit substantially reduced genetic diversity. Here, we report the discovery of a large region on chromosome 10 involved in adaptation or domestication that has been the target of strong selection during maize domestication. Unlike previously described regions in the maize genome, 1.1 Mb and > 15 genes lost genetic diversity during selection at this region. Finally, the prospects of a detailed understanding of maize evolution are discussed with consideration of both top-down and bottom-up approaches.This publication has 94 references indexed in Scilit:
- Patterns of Molecular Evolution Associated With Two Selective Sweeps in the Tb1–Dwarf8 Region in MaizeGenetics, 2008
- Genetic Design and Statistical Power of Nested Association Mapping in MaizeGenetics, 2008
- Linkage Mapping of Domestication Loci in a Large Maize–Teosinte Backcross ResourceGenetics, 2007
- Domestication and Breeding of Tomatoes: What have We Gained and What Can We Gain in the Future?Annals of Botany, 2007
- Late Pleistocene and Holocene environmental history of the Iguala Valley, Central Balsas Watershed of MexicoProceedings of the National Academy of Sciences, 2007
- Conserved noncoding genomic sequences associated with a flowering-time quantitative trait locus in maizeProceedings of the National Academy of Sciences, 2007
- Population Structure and Its Effects on Patterns of Nucleotide Polymorphism in Teosinte (Zea mays ssp. parviglumis)Genetics, 2007
- Plant domestication, a unique opportunity to identify the genetic basis of adaptationProceedings of the National Academy of Sciences, 2007
- Microfossil evidence for pre-Columbian maize dispersals in the neotropics from San Andrés, Tabasco, MexicoProceedings of the National Academy of Sciences, 2007
- Substitution rate comparisons between grasses and palms: synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL.Proceedings of the National Academy of Sciences, 1996