Morphological and ITS1, 5.8S, and Partial ITS2 Ribosomal DNA Sequence Distinctions Between Two Species Playtygyra (Cnidaria: Scleractinia) from Hong Kong
- 1 December 2003
- journal article
- research article
- Published by Springer Nature in Marine Biotechnology
- Vol. 5 (6) , 555-567
- https://doi.org/10.1007/s10126-002-0114-x
Abstract
Two sympatric species of Platygyra have been identified from Hong Kong waters: i.e., P. sinensis and P. pini. The former has been further subdivided into 4 morphotypes based on colony growth form as follows: classic, encrusting, hillocky, and long-valley. Taxonomic confusion raised by overlapping morphological variations and frequent sympatric occurrences, however, has posed problems in relation to Platygyra ecology and population dynamics. This study attempted to differentiate Platygyra pini and morphotypes of P. sinensis by both morphological and ITS1, 5.8S, and partial ITS2 ribosomal DNA sequence analysis. Morphological data based on 9 skeletal characters were subjected to multivariate analysis. No clear groupings were obtained using a multidimensional scaling plot. Most parsimony analysis was conducted using either the rDNA data set including ITS1, 5.8S, and partial ITS2 or the ITS1 region only. Maximum parsimony (MP) and neighbor-joining (NJ) trees obtained from both data sets, clustered samples of P. sinensis and P. pini into 2 clades. The interspecific Kimura 2-parameter sequence divergence value (k2) obtained by the former rDNA data set was 14.275 ± 0.507%, which is greater than the intraspecific values (1.239 ± 1.147% for P. sinensis and 0.469 ± 0.364% for P. pini), indicating that this marker of ITS1, 5.8S, and ITS2 contains substantially high levels of inherent diversity and is useful in resolving the problematic taxonomy of Platygyra.Keywords
This publication has 15 references indexed in Scilit:
- The Evolutionary History of the Coral Genus Acropora (Scleractinia, Cnidaria) Based on a Mitochondrial and a Nuclear Marker: Reticulation, Incomplete Lineage Sorting, or Morphological Convergence?Molecular Biology and Evolution, 2001
- Examination of species boundaries in theAcropora cervicornisgroup (Scleractinia, Cnidaria) using nuclear DNA sequence analysesMolecular Ecology, 2000
- Phylogenetic Relationships in the Coral Family Acroporidae, Reassessed by Inference from Mitochondrial GenesZoological Science, 2000
- Examination of the Montastraea annularis Species Complex (Cnidaria: Scleractinia) Using ITS and COI SequencesMarine Biotechnology, 1999
- Conflicting Morphological and Reproductive Species Boundaries in the Coral Genus PlatygyraThe Biological Bulletin, 1997
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceNucleic Acids Research, 1994
- Balancing Selection at Allozyme Loci in Oysters: Implications from Nuclear RFLPsScience, 1992
- Ribosomal DNA: Molecular Evolution and Phylogenetic InferenceThe Quarterly Review of Biology, 1991
- The 18S ribosomal RNA sequence of the sea anemone Ammonia sulcata and its evolutionary position among other eukaryotesFEBS Letters, 1990
- A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequencesJournal of Molecular Evolution, 1980