GeConT: gene context analysis

8 April 2004

journal article
Published by Oxford University Press (OUP) in Bioinformatics

Vol. 20 (14) , 2307-2308
https://doi.org/10.1093/bioinformatics/bth216

Abstract

Summary: The fact that adjacent genes in bacteria are often functionally related is widely known. GeConT (Gene Context Tool) is a web interface designed to visualize genome context of a gene or a group of genes and their orthologs in all the completely sequenced genomes. The graphical information of GeConT can be used to analyze genome annotation, functional ortholog identification or to verify the genomic context congruence of any set of genes that share a common property. Availability: http://www.ibt.unam.mx/biocomputo/gecont.html

Keywords

GENE CONTEXT ANALYSIS
COMMON PROPERTY
ADJACENT GENE
GENOME CONTEXT
GENOMIC CONTEXT CONGRUENCE
WEB INTERFACE
SEQUENCED GENOMES
FUNCTIONAL ORTHOLOG IDENTIFICATION
GENE CONTEXT TOOL
GENOME ANNOTATION
GRAPHICAL INFORMATION

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