Efficient Prediction of Nucleic Acid Binding Function from Low-resolution Protein Structures
- 10 March 2006
- journal article
- Published by Elsevier in Journal of Molecular Biology
- Vol. 358 (3) , 922-933
- https://doi.org/10.1016/j.jmb.2006.02.053
Abstract
No abstract availableKeywords
This publication has 29 references indexed in Scilit:
- TASSER: An automated method for the prediction of protein tertiary structures in CASP6Proteins-Structure Function and Bioinformatics, 2005
- Moment-based Prediction of DNA-binding ProteinsJournal of Molecular Biology, 2004
- The Role of Water in Protein-DNA RecognitionAnnual Review of Biophysics, 2004
- Recognition of Nucleic Acid Bases and Base-pairs by Hydrogen Bonding to Amino Acid Side-chainsJournal of Molecular Biology, 2003
- Free‐energy component analysis of 40 protein–DNA complexes: A consensus view on the thermodynamics of binding at the molecular levelJournal of Computational Chemistry, 2001
- Structural Features of Protein−Nucleic Acid Recognition SitesBiochemistry, 1999
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997
- Comprehensive Analysis of Hydrogen Bonds in Regulatory Protein DNA-Complexes: In Search of Common PrinciplesJournal of Molecular Biology, 1995
- A framework for the DNA–protein recognition code of the probe helix in transcription factors: the chemical and stereochemical rulesStructure, 1994
- Enlarged representative set of protein structuresProtein Science, 1994