Major submissions tool developments at the European nucleotide archive
Open Access
- 12 November 2011
- journal article
- research article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 40 (D1) , D43-D47
- https://doi.org/10.1093/nar/gkr946
Abstract
The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena), Europe's primary nucleotide sequence resource, captures and presents globally comprehensive nucleic acid sequence and associated information. Covering the spectrum from raw data to assembled and functionally annotated genomes, the ENA has witnessed a dramatic growth resulting from advances in sequencing technology and ever broadening application of the methodology. During 2011, we have continued to operate and extend the broad range of ENA services. In particular, we have released major new functionality in our interactive web submission system, Webin, through developments in template-based submissions for annotated sequences and support for raw next-generation sequence read submissions.Keywords
This publication has 12 references indexed in Scilit:
- c-di-AMP Is a New Second Messenger in Staphylococcus aureus with a Role in Controlling Cell Size and Envelope StressPLoS Pathogens, 2011
- Targeted enrichment of ancient pathogens yielding the pPCP1 plasmid ofYersinia pestisfrom victims of the Black DeathProceedings of the National Academy of Sciences, 2011
- Comparative high-throughput transcriptome sequencing and development of SiESTa, the Silene EST annotation databaseBMC Genomics, 2011
- Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specificationsNature Biotechnology, 2011
- The genomic standards consortium: bringing standards to life for microbial ecologyThe ISME Journal, 2011
- Efficient storage of high throughput DNA sequencing data using reference-based compressionGenome Research, 2011
- The International Nucleotide Sequence Database CollaborationNucleic Acids Research, 2010
- DDBJ progress reportNucleic Acids Research, 2010
- The Sequence Read ArchiveNucleic Acids Research, 2010