The biochemical differentiation of Enterobacter sakazakii genotypes
Open Access
- 26 October 2006
- journal article
- Published by Springer Nature in BMC Microbiology
- Vol. 6 (1) , 94
- https://doi.org/10.1186/1471-2180-6-94
Abstract
Enterobacter sakazakii is an emergent pathogen that has been associated with neonatal infections through contaminated powdered infant milk formula. The species was defined by Farmer et al. (1980) who described 15 biogroups according to the biochemical characterization of 57 strains. This present study compares genotypes (DNA cluster groups based on partial 16S rDNA sequence analysis) with the biochemical traits for 189 E. sakazakii strains. Analysis of partial 16S rDNA sequences gave 4 well defined phylogenetic groups. Cluster group 1 was composed of the majority of strains (170/189) and included Biogroups 1-5, 7-9, 11, 13 and 14. Cluster 3 corresponded with Biogroup 15 and cluster 4 with Biogroups 6, 10 and 12. Cluster group 2 comprised a new Biogroup 16. For the isolates in this study, the four DNA cluster groups can be distinguished using the inositol, dulcitol and indole tests. This study demonstrates an agreement between genotyping (partial 16S rDNA) and biotyping and describes a new biogroup of E. sakazakii.Keywords
This publication has 18 references indexed in Scilit:
- Identification of Enterobacter sakazakii from closely related species: The use of Artificial Neural Networks in the analysis of biochemical and 16S rDNA dataBMC Microbiology, 2006
- 16S rRNA gene based analysis of Enterobacter sakazakii strains from different sources and development of a PCR assay for identificationBMC Microbiology, 2004
- Identification and Phylogeny of Enterobacter sakazakii Relative to Enterobacter and Citrobacter SpeciesJournal of Clinical Microbiology, 2004
- Risk profile of Enterobacter sakazakii, an emergent pathogen associated with infant milk formulaTrends in Food Science & Technology, 2003
- Population Genetics of the Nomenspecies Enterobacter cloacaeApplied and Environmental Microbiology, 2003
- Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology.International Journal of Systematic and Evolutionary Microbiology, 2002
- Enterobacter sakazakiiPublished by American Medical Association (AMA) ,2002
- Report of the ad hoc committee for the re-evaluation of the species definition in bacteriologyInternational Journal of Systematic and Evolutionary Microbiology, 2002
- Taxonomic Note: A Place for DNA-DNA Reassociation and 16S rRNA Sequence Analysis in the Present Species Definition in BacteriologyInternational Journal of Systematic and Evolutionary Microbiology, 1994
- Enterobacter sakazakii: A New Species of "Enterobacteriaceae" Isolated from Clinical SpecimensInternational Journal of Systematic and Evolutionary Microbiology, 1980