Concentrated aqueous urea solutions: A molecular dynamics study of different models
- 10 January 2002
- journal article
- research article
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 116 (4) , 1636-1646
- https://doi.org/10.1063/1.1429958
Abstract
Molecular dynamics studies of concentrated aqueous urea solutions, with urea mole fraction ranging from 0.04 to 0.25, have been performed, essentially focussed on the study of the tendency of urea to self-aggregate. Four of the existing urea models have been studied herein, with number of particles of and It was generally found that unusually long MD runs were required in order to reach proper thermodynamic equilibrium, and particularly so for the systems. This slow convergence of the trajectories is related here to the urea self-aggregation tendency that appears in our calculation not to be limited to pairing processes only. Moreover, no evidence for urea dimerization has been found in the present calculations. Evidence for urea self-aggregation is the most visible in the structural properties, particularly in the way density–density correlations decay to their unit asymptotic limit. Densities, energies, diffusion constants, and structural data have been calculated for all models, and compared with corresponding experimental data. This comparison allows a classification of the different models in terms of their relative agreements with experimental data. Urea aggregation appears to be quite different for different models.
Keywords
This publication has 35 references indexed in Scilit:
- Protein interactions with urea and guanidinium chlorideJournal of Molecular Biology, 1992
- Solvation of hydrophobic species in aqueous urea solution: a molecular dynamics studyJournal of the American Chemical Society, 1984
- Molecular dynamics study of solvation in urea water solutionJournal of the American Chemical Society, 1984
- Computer experiment on aqueous solution. IV. Molecular dynamics calculation on the hydration of urea in an infinitely dilute aqueous solution with a new urea–water pair potentialThe Journal of Chemical Physics, 1984
- Structural Approach to the Solvent Power of Water for Hydrocarbons; Urea as a Structure BreakerThe Journal of Chemical Physics, 1968
- Thermodynamics of protein denaturation. III. Denaturation of ribonuclease in water and in aqueous urea and aqueous ethanol mixturesJournal of the American Chemical Society, 1967
- Thermodynamics of aqueous urea solutionsAustralian Journal of Chemistry, 1967
- The Temperature Dependence of the Enthalpy of Formation of the Amide Hydrogen Bond; the Urea Model1The Journal of Physical Chemistry, 1965
- Effect of Electrolyte and Urea on Micelle Formation1The Journal of Physical Chemistry, 1964
- Nonpolar Group Participation in the Denaturation of Proteins by Urea and Guanidinium Salts. Model Compound StudiesJournal of the American Chemical Society, 1964