A Quantitative Test of Long‐range Correlations and Compositional Fluctuations in DNA Sequences
Open Access
- 1 September 1994
- journal article
- research article
- Published by Wiley in European Journal of Biochemistry
- Vol. 224 (2) , 365-371
- https://doi.org/10.1111/j.1432-1033.1994.00365.x
Abstract
Recent findings concerning long‐range correlations and fractals in intron‐containing DNA sequences of living organisms are tested qualitatively and quantitatively. Extending previous studies, we demonstrate that these findings are trivially equivalent to variations of the base‐pair composition in different regions of a DNA sequence. It is shown explicitly that a well‐defined scaling or fractal exponent does not exist anywhere. Comparisons of natural DNAs with computer‐generated, artificial sequences are made. The present study reveals that certain natural DNA sequences (especially those with compact genomes) do have stochastic characteristics which are intrinsically different from artificial sequences. The results for 21 DNA sequences of various types from widely different taxa are reported.Keywords
This publication has 16 references indexed in Scilit:
- Long-range correlations in DNANature, 1993
- DNA correlationsNature, 1992
- Correlations in intronless DNANature, 1992
- Noisy NucleotidesScientific American, 1992
- DNA Shows Unexplained Patterns Writ LargeScience, 1992
- Humbling of world's AIDS researchersNature, 1992
- Long-range correlations within DNANature, 1992
- Evolution of long-range fractal correlations and 1/fnoise in DNA base sequencesPhysical Review Letters, 1992
- Uncorrelated DNA walksNature, 1992
- Compositional transitions in the nuclear genomes of cold-blooded vertebratesJournal of Molecular Evolution, 1990